Evidence map›Paper›PMID 28223045›Full record

ArticleJournal of structural biology2017

Crystal structures reveal a new and novel FoxO1 binding site within the human glucose-6-phosphatase catalytic subunit 1 gene promoter.

Puja Singh, Eun Hee Han, James A Endrizzi, Richard M O'Brien, Young-In Chi

Open access · greenAbstract read
In one paragraph

Article in Journal of structural biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. FOXO family isoforms.Cell death & disease · 2023
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
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  10. Article
  11. Review
  12. Cannabinoid receptor 1 knockout alleviates hepatic steatosis by downregulating perilipin 2.Laboratory investigation; a journal of technical methods and pathology · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Puja SinghSection of Structural Biology, Hormel Institute, University of Minnesota, Austin, MN 55912, United States.
Eun Hee HanSection of Structural Biology, Hormel Institute, University of Minnesota, Austin, MN 55912, United States.
James A EndrizziSection of Structural Biology, Hormel Institute, University of Minnesota, Austin, MN 55912, United States.
Richard M O'BrienDepartment of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, TN 37232, United States. Electronic address: richard.obrien@vanderbilt.edu.
Young-In ChiSection of Structural Biology, Hormel Institute, University of Minnesota, Austin, MN 55912, United States. Electronic address: ychi@hi.umn.edu.
Hormel (United States) · USUniversity of Minnesota · USVanderbilt University · US

Funding

Regulation of Insulin Secretion by G6PC2R01DK092589 · NIDDK · VANDERBILT UNIVERSITY · PI O'BRIEN, RICHARD M · 2011 to 2014
$1.4M
NIDDK NIH HHS R01 DK092589
6 · The paper itself

Abstract

Human glucose-6-phosphatase plays a vital role in blood glucose homeostasis and holds promise as a therapeutic target for diabetes. Expression of its catalytic subunit gene 1 (G6PC1) is tightly regulated by metabolic-response transcription factors such as FoxO1 and CREB. Although at least three potential FoxO1 binding sites (insulin response elements, IREs) and one CREB binding site (cAMP response element, CRE) within the proximal region of the G6PC1 promoter have been identified, the interplay between FoxO1 and CREB and between FoxO1 bound at multiple IREs has not been well characterized. Here we present the crystal structures of the FoxO1 DNA binding domain in complex with the G6PC1 promoter. These complexes reveal the presence of a new non-consensus FoxO1 binding site that overlaps the CRE, suggesting a mutual exclusion mechanism for FoxO1 and CREB binding at the G6PC1 promoter. Additional findings include (i) non-canonical FoxO1 recognition sites, (ii) incomplete FoxO1 occupancies at the available IRE sites, and (iii) FoxO1 dimeric interactions that may play a role in stabilizing DNA looping. These findings provide insight into the regulation of G6PC1 gene transcription by FoxO1, and demonstrate a high versatility of target gene recognition by FoxO1 that correlates with its diverse roles in biology.

Indexed as

Promoter Regions, GeneticBinding SitesCatalytic DomainCrystallography, X-RayCyclic AMP Response Element-Binding ProteinForkhead Box Protein O1Gene Expression RegulationGlucose-6-PhosphataseHumansTranscription FactorsCREB1 protein, humanCyclic AMP Response Element-Binding ProteinForkhead Box Protein O1FOXO1 protein, humanG6PC1 protein, humanGlucose-6-PhosphataseTranscription FactorsCREBCrystal structureFoxO1Gene regulationGluconeogenesisGlucose-6-phosphataseProtein-DNA interaction

Identifiers

PMID28223045
PMCPMC5443350
OpenAlexW2589887904

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.