Evidence map›Paper›PMID 28220836›Full record

ArticleScientific reports2017

Nucleobindin 1 binds to multiple types of pre-fibrillar amyloid and inhibits fibrillization.

Alessandra Bonito-Oliva, Shahar Barbash, Thomas P Sakmar, W Vallen Graham

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Amyloid inhibition by molecular chaperonesRSC medicinal chemistry · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Nucleobindin-2 consists of two structural components: The ZnComputational and structural biotechnology journal · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alessandra Bonito-OlivaLaboratory of Chemical Biology &Signal Transduction, The Rockefeller University, New York, NY 10065, USA.
Shahar BarbashLaboratory of Chemical Biology &Signal Transduction, The Rockefeller University, New York, NY 10065, USA.
Thomas P SakmarLaboratory of Chemical Biology &Signal Transduction, The Rockefeller University, New York, NY 10065, USA.
W Vallen GrahamLaboratory of Chemical Biology &Signal Transduction, The Rockefeller University, New York, NY 10065, USA.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

During amyloid fibril formation, amyloidogenic polypeptides misfold and self assemble into soluble pre-fibrillar aggregates, i.e., protofibrils, which elongate and mature into insoluble fibrillar aggregates. An emerging class of chaperones, chaperone-like amyloid binding proteins (CLABPs), has been shown to interfere with aggregation of particular misfolded amyloid peptides or proteins. We have discovered that the calcium-binding protein nuclebindin-1 (NUCB1) is a novel CLABP. We show that NUCB1 inhibits aggregation of islet-amyloid polypeptide associated with type 2 diabetes mellitus, a-synuclein associated with Parkinson's disease, transthyretin V30M mutant associated with familial amyloid polyneuropathy, and Aβ42 associated with Alzheimer's disease by stabilizing their respective protofibril intermediates. Kinetic studies employing the modeling software AmyloFit show that NUCB1 affects both primary nucleation and secondary nucleation. We hypothesize that NUCB1 binds to the common cross-β-sheet structure of protofibril aggregates to "cap" and stabilize soluble macromolecular complexes. Transmission electron microscopy and atomic force microscopy were employed to characterize the size, shape and volume distribution of multiple sources of NUCB1-capped protofibrils. Interestingly, NUCB1 prevents Aβ42 protofibril toxicity in a cellular assay. NUCB1-stabilized amyloid protofibrils could be used as immunogens to prepare conformation-specific antibodies and as novel tools to develop screens for anti-protofibril diagnostics and therapeutics.

Indexed as

alpha-SynucleinAmyloidAmyloid beta-PeptidesCalcium-Binding ProteinsDiabetes Mellitus, Type 2DNA-Binding ProteinsHumansIslet Amyloid PolypeptideKineticsMicroscopy, Atomic ForceMutagenesis, Site-DirectedNerve Tissue ProteinsNucleobindinsParkinson DiseasePeptide FragmentsPrealbuminalpha-SynucleinAmyloidAmyloid beta-Peptidesamyloid beta-protein (1-42)amyloid prealbuminCalcium-Binding ProteinsDNA-Binding ProteinsIslet Amyloid PolypeptideNerve Tissue ProteinsNUCB1 protein, humanNucleobindinsPeptide FragmentsPrealbumin

Identifiers

PMID28220836
PMCPMC5318909

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.