Evidence map›Paper›PMID 28220427›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2017

Quantitative Evaluation of Plant Actin Cytoskeletal Organization During Immune Signaling.

Yi-Ju Lu, Brad Day

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yi-Ju LuDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA.
Brad DayDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, 48824, USA. bday@msu.edu.
Michigan State University · US

Funding

Nucleocytoplasmic regulation of pathogen-induced actin dynamics.R01GM125743 · NIGMS · MICHIGAN STATE UNIVERSITY · PI DAY, ROBERT BRADLEY · 2018 to 2021
$1.2M
NIGMS NIH HHS R01 GM125743
6 · The paper itself

Abstract

High spatial and temporal resolution microscopy-based methods are valuable tools for the precise real-time imaging of changes in cellular organization in response to stimulus perception. Here, we describe a quantitative method for the evaluation of the plant actin cytoskeleton during immune stimulus perception and the activation of defense signaling. As a measure of the biotic stress-induced changes in actin filament organization, we present methods for analyzing changes in actin filament organization following elicitation of pattern-triggered immunity and effector-triggered immunity. Using these methods, it is possible to not only quantitatively evaluate changes in actin cytoskeletal organization following biotic stress perception, but to also use these protocols to assess changes in actin filament organization following perception of a wide range of stimuli, including abiotic and developmental cues. As described herein, we present an example application of this method, designed to evaluate changes in actin cytoskeletal organization following pathogen perception and immune signaling.

Indexed as

Actin CytoskeletonArabidopsisMicroscopy, ConfocalPlant DiseasesPlant ImmunityPseudomonas syringaeSignal TransductionActin cytoskeletonConfocal microscopyETIImmune signalingPAMPPseudomonas syringaePTIQuantitative evaluation

Identifiers

PMID28220427
PMCPMC6347973
OpenAlexW2589197019

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.