Evidence map›Paper›PMID 28219340›Full record

ArticleBMC evolutionary biology2017

Very high MHC Class IIB diversity without spatial differentiation in the mediterranean population of greater Flamingos.

Mark A F Gillingham, Arnaud Béchet, Alexandre Courtiol, Manuel Rendón-Martos, Juan A Amat, Boudjéma Samraoui, Ortaç Onmuş, Simone Sommer, Frank Cézilly

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 8 institutions in 6 countries.

Mark A F GillinghamUniversity of Ulm, Institute of Evolutionary Ecology and Conservation Genomics, Albert-Einstein Allee 11, D-89069, Ulm, Germany. Mark.Gillingham@uni-ulm.de.
Arnaud BéchetCentre de Recherche de la Tour du Valat, Le Sambuc, 13200, Arles, France.
Alexandre CourtiolLeibniz Institute for Zoo and Wildlife Research, Evolutionary Genetics, Alfred-Kowalke-Str. 17, D-10315, Berlin, Germany.
Manuel Rendón-MartosR.N. Laguna de Fuente de Piedra, Consejería de Medio Ambiente y Ordenación del Territorio, Junta de Andalucía, Apartado 1, E-29520 Fuente de Piedra, (Málaga), Spain.
Juan A AmatDepartment of Wetland Ecology, Estación Biológica de Doñana, (EBD-CSIC), calle Américo Vespucio s/n, E-41092, Sevilla, Spain.
Boudjéma SamraouiCenter of Excellence for Research in Biodiversity, King Saud University, Riyadh, Saudi Arabia.
Ortaç OnmuşNatural History Museum, Faculty of Sciences, Department of Biology, Ege University, Bornova, İzmir, Turkey.
Simone SommerUniversity of Ulm, Institute of Evolutionary Ecology and Conservation Genomics, Albert-Einstein Allee 11, D-89069, Ulm, Germany.
Frank CézillyUniversité de Bourgogne, Equipe Ecologie Evolutive, UMR CNRS 6282 Biogéosciences, 6 bd. Gabriel, 21000, Dijon, France.
Universität Ulm · DEBerlin Center for Genomics in Biodiversity Research · DEEge University · TREstación Biológica de Doñana · ESInstitut Universitaire de France · FRJunta de Andalucía · ESKing Saud University · SATour du Valat · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSelective pressure from pathogens is thought to shape the allelic diversity of major histocompatibility complex (MHC) genes in vertebrates. In particular, both local adaptation to pathogens and gene flow are thought to explain a large part of the intraspecific variation observed in MHC allelic diversity. To date, however, evidence that adaptation to locally prevalent pathogens maintains MHC variation is limited to species with limited dispersal and, hence, reduced gene flow. On the one hand high gene flow can disrupt local adaptation in species with high dispersal rates, on the other hand such species are much more likely to experience spatial variation in pathogen pressure, suggesting that there may be intense pathogen mediated selection pressure operating across breeding sites in panmictic species. Such pathogen mediated selection pressure operating across breeding sites should therefore be sufficient to maintain high MHC diversity in high dispersing species in the absence of local adaptation mechanisms. We used the Greater Flamingo, Phoenicopterus roseus, a long-lived colonial bird showing a homogeneous genetic structure of neutral markers at the scale of the Mediterranean region, to test the prediction that higher MHC allelic diversity with no population structure should occur in large panmictic populations of long-distance dispersing birds than in other resident species.

resultsWe assessed the level of allelic diversity at the MHC Class IIB exon 2 from 116 individuals born in four different breeding colonies of Greater Flamingo in the Mediterranean region. We found one of the highest allelic diversity (109 alleles, 2 loci) of any non-passerine avian species investigated so far relative to the number of individuals and loci genotyped. There was no evidence of population structure between the four major Mediterranean breeding colonies.

conclusionOur results suggest that local adaptation at MHC Class IIB in Greater Flamingos is constrained by high gene flow and high MHC diversity appears to be maintained by population wide pathogen-mediated selection rather than local pathogen-mediated selection. Further understanding of how pathogens vary across space and time will be crucial to further elucidate the mechanisms maintaining MHC diversity in species with large panmictic populations and high dispersal rates.

Indexed as

Genetic VariationAllelesAnimalsBirdsExonsGene FlowGenes, MHC Class IIGenotypeHistocompatibility Antigens Class IISelection, GeneticHistocompatibility Antigens Class IIAllelic diversityGreater flamingosLocal adaptationMHC genesPathogen-mediated balancing selection

Identifiers

PMID28219340
PMCPMC5319168
OpenAlexW2590453134

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.