Evidence map›Paper›PMID 28214511›Full record

ArticleJournal of molecular biology2017

Identification of a Degradation Signal Sequence within Substrates of the Mitochondrial i-AAA Protease.

Anthony J Rampello, Steven E Glynn

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Molecular mechanisms of mitochondrial AAA+ proteases.The Journal of biological chemistry · 2026
    Review
  2. Recognition of small Tim chaperones by the mitochondrial Yme1 protease.Protein science : a publication of the Protein Society · 2026
    Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Proteolytic Control of Lipid Metabolism.ACS chemical biology · 2019
    Review
  10. Review
  11. Article
  12. Article
  13. Mitochondrial Proteolysis and Metabolic Control.Cold Spring Harbor perspectives in biology · 2019
    Review
  14. Review
  15. Article
  16. Molecular insights into theThe Journal of biological chemistry · 2017
    Article
  17. Article
  18. Review
  19. Multifunctional Mitochondrial AAA Proteases.Frontiers in molecular biosciences · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Anthony J RampelloDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY, 11794-5215, USA.
Steven E GlynnDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY, 11794-5215, USA. Electronic address: steven.glynn@stonybrook.edu.
Stony Brook University · US

Funding

Using rebuilt AAA+ enzymes to uncover the mechanisms of proteolysis at the mitochondrial inner membraneR01GM115898 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI GLYNN, STEVEN · 2015 to 2024
$3.0M
MOLECULAR AND CELLULAR BIOLOGY TRAINING PROGRAMT32GM008468 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI NEIMAN, AARON M · 1997 to 2016
$1.9M
Acquisition of an Applied Biosystems 4000 QTRAP Mass SpectrometerS10RR023680 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI IDEN, CHARLES R · 2007 to 2007
$435k
NCRR NIH HHS S10 RR023680NIGMS NIH HHS R01 GM115898NIGMS NIH HHS T32 GM008468
6 · The paper itself

Abstract

The i-AAA protease is a component of the mitochondrial quality control machinery that regulates respiration, mitochondrial dynamics, and protein import. The protease is required to select specific substrates for degradation from among the diverse complement of proteins present in mitochondria, yet the rules that govern this selection are unclear. Here, we reconstruct the yeast i-AAA protease, Yme1p, to examine the in vitro degradation of two intermembrane space chaperone subunits, Tim9 and Tim10. Yme1p degrades Tim10 more rapidly than Tim9 despite high sequence and structural similarity, and loss of Tim10 is accelerated by the disruption of conserved disulfide bonds within the substrate. An unstructured N-terminal region of Tim10 is necessary and sufficient to target the substrate to the protease through recognition of a short phenylalanine-rich motif, and the presence of similar motifs in other small Tim proteins predicts robust degradation by the protease. Together, these results identify the first specific degron sequence within a native i-AAA protease substrate.

Indexed as

ProteolysisATP-Dependent ProteasesDisulfidesKineticsMembrane ProteinsMitochondrial Membrane Transport ProteinsMitochondrial Precursor Protein Import Complex ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsATP-Dependent ProteasesDisulfidesMembrane ProteinsMitochondrial Membrane Transport ProteinsMitochondrial Precursor Protein Import Complex ProteinsSaccharomyces cerevisiae ProteinsTIM10 protein, S cerevisiaeTim9 protein, S cerevisiaeYME1 protein, S cerevisiaeAAA+degronintermembrane spacemitochondriaprotein quality control

Identifiers

PMID28214511
PMCPMC5402353
OpenAlexW2587806382

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.