Evidence map›Paper›PMID 28213899›Full record

ArticleMicrobiologyOpen2017

Human influence and biotic homogenization drive the distribution of Escherichia coli virulence genes in natural habitats.

Adriana Cabal, Joaquin Vicente, Julio Alvarez, Jose Angel Barasona, Mariana Boadella, Lucas Dominguez, Christian Gortazar

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Long-Term Determinants of the Seroprevalence ofAnimals : an open access journal from MDPI · 2020
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Adriana CabalVISAVET Health Surveillance Centre, Universidad Complutense, Madrid, Spain.ORCID 0000-0001-9346-1612
Joaquin VicenteSaBio IREC, National Wildlife Research Institute (CSIC-UCLM-JCCM), Ciudad Real, Spain.
Julio AlvarezDepartment of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA.
Jose Angel BarasonaSaBio IREC, National Wildlife Research Institute (CSIC-UCLM-JCCM), Ciudad Real, Spain.
Mariana BoadellaSaBio IREC, National Wildlife Research Institute (CSIC-UCLM-JCCM), Ciudad Real, Spain.
Lucas DominguezVISAVET Health Surveillance Centre, Universidad Complutense, Madrid, Spain.
Christian GortazarSaBio IREC, National Wildlife Research Institute (CSIC-UCLM-JCCM), Ciudad Real, Spain.
Consejo Superior de Investigaciones Científicas · ESUniversidad Complutense de Madrid · ESUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cattle are the main reservoirs for Shiga-toxin-producing Escherichia coli (STEC), the only known zoonotic intestinal E. coli pathotype. However, there are other intestinal pathotypes that can cause disease in humans, whose presence has been seldom investigated. Thus, our aim was to identify the effects of anthropic pressure and of wild and domestic ungulate abundance on the distribution and diversity of the main human E. coli pathotypes and nine of their representative virulence genes (VGs). We used a quantitative real-time PCR (qPCR) for the direct detection and quantification of the genus-specific gene uidA, nine E. coli VGs (stx1, sxt2, eae, ehxA, aggR, est, elt, bfpA, invA), as well as four genes related to O157:H7 (rfb

Indexed as

EcosystemEvolution, MolecularGenotypeAnimalsAnimals, DomesticAnimals, WildCattleDeerEscherichia coli InfectionsEscherichia coli O157FecesReal-Time Polymerase Chain ReactionSpainSus scrofaVirulence FactorsWater MicrobiologyVirulence FactorsEscherichia colinatural habitatspathotypesvirulence geneswildlife

Identifiers

PMID28213899
PMCPMC5458461
OpenAlexW2588675373

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.