Evidence map›Paper›PMID 28209364›Full record

ArticleJournal of pharmaceutical sciences2017

Variable Threshold Method for Determining the Boundaries of Imaged Subvisible Particles.

Richard E Cavicchi, Cayla Collett, Srivalli Telikepalli, Zhishang Hu, Michael Carrier, Dean C Ripple

Abstract read
In one paragraph

Article in Journal of pharmaceutical sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Richard E CavicchiBioprocess Measurements Group, National Institute of Standards and Technology, Gaithersburg, Maryland 20899. Electronic address: rcavicchi@nist.gov.
Cayla CollettWest Virginia Wesleyan College, Buckhannon, West Virginia 26201.
Srivalli TelikepalliBioprocess Measurements Group, National Institute of Standards and Technology, Gaithersburg, Maryland 20899.
Zhishang HuCenter for Computational and Systems Biology, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Michael CarrierBioprocess Measurements Group, National Institute of Standards and Technology, Gaithersburg, Maryland 20899.
Dean C RippleBioprocess Measurements Group, National Institute of Standards and Technology, Gaithersburg, Maryland 20899.

Funding

Intramural NIST DOC 9999-NIST
6 · The paper itself

Abstract

An accurate assessment of particle characteristics and concentrations in pharmaceutical products by flow imaging requires accurate particle sizing and morphological analysis. Analysis of images begins with the definition of particle boundaries. Commonly a single threshold defines the level for a pixel in the image to be included in the detection of particles, but depending on the threshold level, this results in either missing translucent particles or oversizing of less transparent particles due to the halos and gradients in intensity near the particle boundaries. We have developed an imaging analysis algorithm that sets the threshold for a particle based on the maximum gray value of the particle. We show that this results in tighter boundaries for particles with high contrast, while conserving the number of highly translucent particles detected. The method is implemented as a plugin for FIJI, an open-source image analysis software. The method is tested for calibration beads in water and glycerol/water solutions, a suspension of microfabricated rods, and stir-stressed aggregates made from IgG. The result is that appropriate thresholds are automatically set for solutions with a range of particle properties, and that improved boundaries will allow for more accurate sizing results and potentially improved particle classification studies.

Indexed as

Protein AggregatesAlgorithmsGlycerolHumansImage Processing, Computer-AssistedImmunoglobulin GParticle SizeWaterGlycerolImmunoglobulin GProtein AggregatesWaterflow imagingimage analysismicroscopyparticle sizingphysical characterizationprotein aggregates

Identifiers

PMID28209364
PMCPMC5535275

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.