Evidence map›Paper›PMID 28207984›Full record

ArticleChembiochem : a European journal of chemical biology2017

Structural Basis of Microtubule Stabilization by Discodermolide.

Andrea E Prota, Katja Bargsten, Mariano Redondo-Horcajo, Amos B Smith, Chia-Ping H Yang, Hayley M McDaid, Ian Paterson, Susan B Horwitz, José Fernando Díaz, Michel O Steinmetz

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Andrea E ProtaLaboratory of Biomolecular Research, Department of Biology and Chemistry, Paul Scherrer Institut, OFLC/111, 5232, Villigen PSI, Switzerland.ORCID 0000-0003-0875-5339
Katja BargstenLaboratory of Biomolecular Research, Department of Biology and Chemistry, Paul Scherrer Institut, OFLC/111, 5232, Villigen PSI, Switzerland.
Mariano Redondo-HorcajoChemical and Physical Biology, Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas CIB-CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.ORCID 0000-0002-9329-4786
Amos B SmithDepartment of Chemistry, University of Pennsylvania, 231 S. 34th Street, Philadelphia, PA, 19104, USA.
Chia-Ping H YangDepartment of Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Golding 201, Bronx, NY, 1046, USA.
Hayley M McDaidDepartment of Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Golding 201, Bronx, NY, 1046, USA.
Ian PatersonUniversity Chemical Laboratory, Cambridge University, Lensfield Road, Cambridge, CB2 1EW, UK.
Susan B HorwitzDepartment of Molecular Pharmacology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Golding 201, Bronx, NY, 1046, USA.
José Fernando DíazChemical and Physical Biology, Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas CIB-CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.ORCID 0000-0003-2743-3319
Michel O SteinmetzLaboratory of Biomolecular Research, Department of Biology and Chemistry, Paul Scherrer Institut, OFLC/111, 5232, Villigen PSI, Switzerland.

Funding

TAXOL--MECHANISMS OF ACTION AND RESISTANCER01CA077263 · NCI · YESHIVA UNIVERSITY · PI HORWITZ, SUSAN BAND, MCDAID, HAYLEY M. · 1998 to 2019
$7.8M
NCI NIH HHS R01 CA077263
6 · The paper itself

Abstract

Microtubule-stabilizing agents (MSAs) are widely used in chemotherapy. Using X-ray crystallography we elucidated the detailed binding modes of two potent MSAs, (+)-discodermolide (DDM) and the DDM-paclitaxel hybrid KS-1-199-32, in the taxane pocket of β-tubulin. The two compounds bind in a very similar hairpin conformation, as previously observed in solution. However, they stabilize the M-loop of β-tubulin differently: KS-1-199-32 induces an M-loop helical conformation that is not observed for DDM. In the context of the microtubule structure, both MSAs connect the β-tubulin helices H6 and H7 and loop S9-S10 with the M-loop. This is similar to the structural effects elicited by epothilone A, but distinct from paclitaxel. Together, our data reveal differential binding mechanisms of DDM and KS-1-199-32 on tubulin.

Indexed as

AlkanesBinding SitesBridged-Ring CompoundsCarbamatesCrystallography, X-RayHumansLactonesMicrotubulesPyronesTaxoidsTubulinTubulin ModulatorsAlkanesBridged-Ring CompoundsCarbamatesdiscodermolideLactonesPyronestaxaneTaxoidsTubulinTubulin Modulatorsdrug designmicrotubulesmolecular mechanism of actionstructure elucidationX-ray crystallography

Identifiers

PMID28207984
PMCPMC5559732

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.