Evidence map›Paper›PMID 28206607›Full record

ArticleGenome biology and evolution2017

Evolution of Dosage Compensation in Anolis carolinensis, a Reptile with XX/XY Chromosomal Sex Determination.

Shawn M Rupp, Timothy H Webster, Kimberly C Olney, Elizabeth D Hutchins, Kenro Kusumi, Melissa A Wilson Sayres

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 44 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Sex Chromosome Evolution: Hallmarks and Question Marks.Molecular biology and evolution · 2024
    Review
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  7. Article
  8. Article
  9. Article
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  12. Article
  13. Review
  14. Whole-chromosome fusions in the karyotype evolution ofPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Article
  15. Thermosensitive sex chromosome dosage compensation in ZZ/ZW softshell turtles,Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Article
  16. A brief review of vertebrate sex evolution with a pledge for integrative research: towards 'Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
  17. Article
  18. Review
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shawn M RuppSchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
Timothy H WebsterSchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
Kimberly C OlneySchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
Elizabeth D HutchinsSchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
Kenro KusumiSchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
Melissa A Wilson SayresSchool of Life Sciences, Arizona State University, Tempe, AZ, USA.
Arizona State University · US

Funding

Developing the Anolis Lizard as a Model of Musculoskeletal RegenerationR21RR031305 · NCRR · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI KUSUMI, KENRO · 2010 to 2011
$413k
Connecting the proteome and transcriptome during regenerationR21AR064935 · NIAMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI KUSUMI, KENRO · 2013 to 2014
$345k
NCRR NIH HHS R21 RR031305NIAMS NIH HHS R21 AR064935
6 · The paper itself

Abstract

In species with highly heteromorphic sex chromosomes, the degradation of one of the sex chromosomes will result in unequal gene expression between the sexes (e.g. between XX females and XY males) and between the sex chromosomes and the autosomes. Dosage compensation is a process whereby genes on the sex chromosomes achieve equal gene expression. We compared genome-wide levels of transcription between males and females, and between the X chromosome and the autosomes in the green anole, Anolis carolinensis. We present evidence for dosage compensation between the sexes, and between the sex chromosomes and the autosomes. When dividing the X chromosome into regions based on linkage groups, we discovered that genes in the first reported X-linked region, anole linkage group b (LGb), exhibit complete dosage compensation, although the rest of the X-linked genes exhibit incomplete dosage compensation. Our data further suggest that the mechanism of this dosage compensation is upregulation of the X chromosome in males. We report that approximately 10% of coding genes, most of which are on the autosomes, are differentially expressed between males and females. In addition, genes on the X chromosome exhibited higher ratios of nonsynonymous to synonymous substitution than autosomal genes, consistent with the fast-X effect. Our results from the green anole add an additional observation of dosage compensation in a species with XX/XY sex determination.

Indexed as

X ChromosomeAnimalsDosage Compensation, GeneticFemaleGene Expression RegulationLizardsMaleSex CharacteristicsSex Determination Processes

Identifiers

PMID28206607
PMCPMC5381669
OpenAlexW2555017786

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.