Evidence map›Paper›PMID 28205416›Full record

ArticleEnvironmental microbiology2017

Ecological implications of hypoxia-triggered shifts in secondary metabolism.

Kelley A Gallagher, Greg Wanger, Jane Henderson, Mark Llorente, Chambers C Hughes, Paul R Jensen

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Environmental microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. MAR4Journal of natural products · 2024
    Review
  6. Article
  7. Detection of Natural Products and Their Producers in Ocean Sediments.Applied and environmental microbiology · 2019
    Article
  8. Review
  9. Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Kelley A GallagherScripps Institution of Oceanography, Center for Marine Biotechnology and Biomedicine, University of California San Diego, La Jolla, CA, USA.
Greg WangerDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, USA.
Jane HendersonDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA, USA.
Mark LlorenteDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA, USA.
Chambers C HughesScripps Institution of Oceanography, Center for Marine Biotechnology and Biomedicine, University of California San Diego, La Jolla, CA, USA.
Paul R JensenScripps Institution of Oceanography, Center for Marine Biotechnology and Biomedicine, University of California San Diego, La Jolla, CA, USA.
University of California, San Diego · USScripps Institution of Oceanography · USUniversity of Southern California · US

Funding

Natural Product Genome MiningR01GM085770 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JENSEN, PAUL R, MOORE, BRADLEY S · 2009 to 2024
$5.8M
Training Program in Marine BiotechnologyT32GM067550 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GERWICK, WILLIAM HENRY · 2004 to 2019
$2.0M
NIGMS NIH HHS R01 GM085770NIGMS NIH HHS T32 GM067550
6 · The paper itself

Abstract

Members of the actinomycete genus Streptomyces are non-motile, filamentous bacteria that are well-known for the production of biomedically relevant secondary metabolites. While considered obligate aerobes, little is known about how these bacteria respond to periods of reduced oxygen availability in their natural habitats, which include soils and ocean sediments. Here, we provide evidence that the marine streptomycete strain CNQ-525 can reduce MnO

Indexed as

AnaerobiosisAnti-Bacterial AgentsBiosynthetic PathwaysEcologyGeologic SedimentsManganese CompoundsNaphthalenesNaphthoquinonesOxidation-ReductionOxidesOxygenSecondary MetabolismStreptomyces8-amino-2,5,7-trihydroxynaphthalene-1,4-dioneAnti-Bacterial AgentsManganese Compoundsmanganese dioxideNaphthalenesNaphthoquinonesnapyradiomycin A1OxidesOxygen

Identifiers

PMID28205416
PMCPMC5481476
OpenAlexW2591245593

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.