ArticleJournal of experimental botany2017
Genetic factors underlying boron toxicity tolerance in rice: genome-wide association study and transcriptomic analysis.
Article in Journal of experimental botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- Single-cell transcriptional profiling in Arabidopsis root exposed to boron toxicity at seedling stages.Plant molecular biology · 2025Article
- Transcriptome and gene co-expression network analysis revealed a putative regulatory mechanism of low nitrogen response in rice seedlings.Frontiers in plant science · 2025Article
- Kiwifruit sensitivity to boron: impact on physiological and molecular responses.Frontiers in plant science · 2025Article
- Salicylic Acid and Melatonin Synergy Enhances Boron Toxicity Tolerance via AsA-GSH Cycle and Glyoxalase System Regulation in Fragrant Rice.Metabolites · 2024Article
- Leaf Proteomic Analysis in Seedlings of Two Maize Landraces with Different Tolerance to Boron Toxicity.Plants (Basel, Switzerland) · 2023Article
- Waxy is an important factor for grain fissure resistance and head rice yield as revealed by a genome-wide association study.Journal of experimental botany · 2022Article
- Proteomic and Genomic Studies of Micronutrient Deficiency and Toxicity in Plants.Plants (Basel, Switzerland) · 2022Review
- Comprehensive Genome-Scale Analysis of Esophageal Carcinoma With Esophageal Tissue-Resident Micro-Environment Discrepancy.Frontiers in microbiology · 2022Article
- Combined QTL mapping and RNA-Seq profiling reveals candidate genes associated with cadmium tolerance in barley.PloS one · 2020Article
- Genome-wide association study for salinity tolerance at the flowering stage in a panel of rice accessions from Thailand.BMC genomics · 2019Article
- Genetic Diversity Linked to Haplotype Variation in the World Core Collection ofFrontiers in plant science · 2019Article
- Genome-wide association study to identify candidate loci and genes for Mn toxicity tolerance in rice.PloS one · 2018Article
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4 authors.
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Abstract
Boron (B) toxicity is a nutritional disorder affecting crop production in many parts of the world. This study explored genetic factors associated with B tolerance in rice (Oryza sativa L.) through an integrated genome mapping and transcriptomic approach. Variation in B tolerance was first evaluated by screening a panel of 137 indica genotypes in B toxic conditions (+2 mM B), followed by genome-wide association study (GWAS). Leaf bronzing and greenness were significantly correlated with shoot and root dry weight, but B uptake was not correlated with any stress phenotype. Single nucleotide polymorphism (SNP) markers exceeding a significance value of –log10P>4.0 were obtained for four traits, namely leaf bronzing, shoot dry weight, root dry weight, and root length. Linkage disequilibrium block analysis of the corresponding chromosomal regions revealed candidate loci containing 75 gene models. Two contrasting genotypes from the panel were selected for transcriptomic analysis, which included gene ontology enrichment analysis of differentially regulated genes and investigating transcriptional responses of GWAS candidate genes. Characteristic expression patterns associated with tolerance or sensitivity were seen in genes related to biochemical binding, transport, transcriptional regulation, and redox homeostasis. These results advance the understanding of genetic and physiological factors associated with B tolerance in rice.
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