Evidence map›Paper›PMID 28201998›Full record

ArticleBMC cancer2017

Clinical performance evaluation of a sensitive, rapid low-throughput test for KRAS mutation analysis using formalin-fixed, paraffin-embedded tissue samples.

Christine Weyn, Sofie Van Raemdonck, Robina Dendooven, Vincent Maes, Karen Zwaenepoel, Suzan Lambin, Patrick Pauwels

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Molecular pathological classification of colorectal cancer-an update.Virchows Archiv : an international journal of pathology · 2024
    Review
  3. The ideal reporting ofPathologica · 2023
    Review
  4. Article
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  7. Article
  8. Testing forDisease markers · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Christine WeynPathology Department, University Hospital Antwerp, Wilrijkstraat 10, 2650, Edegem, Belgium. christine.weyn@uza.be.ORCID 0000-0002-7801-7000
Sofie Van RaemdonckPathology Department, University Hospital Antwerp, Wilrijkstraat 10, 2650, Edegem, Belgium.
Robina DendoovenPathology Department, University Hospital Antwerp, Wilrijkstraat 10, 2650, Edegem, Belgium.
Vincent MaesPathology Department, University Hospital Antwerp, Wilrijkstraat 10, 2650, Edegem, Belgium.
Karen ZwaenepoelPathology Department, University Hospital Antwerp, Wilrijkstraat 10, 2650, Edegem, Belgium.
Suzan LambinPathology Department, University Hospital Antwerp, Wilrijkstraat 10, 2650, Edegem, Belgium.
Patrick PauwelsPathology Department, University Hospital Antwerp, Wilrijkstraat 10, 2650, Edegem, Belgium.
Antwerp University Hospital · BEUniversity of Antwerp · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTesting for KRAS mutations in metastatic colorectal cancer (mCRC) on formalin-fixed, paraffin embedded (FFPE) tumor tissue has become standard of care. Different molecular methods exist to determine hotspot KRAS mutations in exon 2, 3 and 4, but testing is often limited by the sensitivity and the speed of analysis. The aim of this retrospective study was to establish the clinical performance of the Idylla™ KRAS Mutation Test on FFPE tumor samples of patients with mCRC.

methodsKRAS mutation analysis was performed using the therascreen KRAS on the RotorGene Q platform (CE-IVD; Qiagen) and results were subsequently compared to the Idylla™ KRAS Mutation Test. Discordant result testing was performed with massive parallel sequencing or alternative routine approaches.

resultsData from 182 samples were used to show that the overall agreement between the two methods for mutation characterization was 96.7% [95%CI: 93.0%-98.5%]. Six out of 182 samples (3.3%) showed true discordant results.

conclusionThe Idylla™ KRAS Mutation Test allows for a fast and reliable analysis of FFPE samples with a turnaround-time of two hours without the need of molecular infrastructure or expertise in order to guide the personalized treatment of colorectal cancer patients.

Indexed as

Colorectal NeoplasmsDNA Mutational AnalysisFormaldehydeHumansLimit of DetectionMutationParaffin EmbeddingProto-Oncogene Proteins p21(ras)FormaldehydeKRAS protein, humanProto-Oncogene Proteins p21(ras)FFPEIdyllaKRASMetastatic colorectal carcinomaMutation analysis

Identifiers

PMID28201998
PMCPMC5312443
OpenAlexW2588416432

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.