Evidence map›Paper›PMID 28199403›Full record

ArticlePloS one2017

Comparison of microbiological diagnosis of urinary tract infection in young children by routine health service laboratories and a research laboratory: Diagnostic cohort study.

Kate Birnie, Alastair D Hay, Mandy Wootton, Robin Howe, Alasdair MacGowan, Penny Whiting, Michael Lawton, Brendan Delaney, Harriet Downing, Jan Dudley and 13 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 11 institutions in 1 country.

Kate BirnieSchool of Social and Community Medicine, University of Bristol, Bristol, United Kingdom.
Alastair D HayCentre for Academic Primary Care, NIHR School of Primary Care Research, School of Social and Community Medicine, University of Bristol, Bristol, United Kingdom.
Mandy WoottonSpecialist Antimicrobial Chemotherapy Unit, Public Health Wales Microbiology Cardiff, University Hospital Wales, Cardiff, United Kingdom.
Robin HoweSpecialist Antimicrobial Chemotherapy Unit, Public Health Wales Microbiology Cardiff, University Hospital Wales, Cardiff, United Kingdom.
Alasdair MacGowanNorth Bristol NHS Trust, Bristol, United Kingdom.
Penny WhitingSchool of Social and Community Medicine, University of Bristol, Bristol, United Kingdom.
Michael LawtonSchool of Social and Community Medicine, University of Bristol, Bristol, United Kingdom.
Brendan DelaneyNIHR Biomedical Research Centre at Guy's and St Thomas' NHS Foundation Trust and King's College London, Department of Primary Care and Public Health Sciences, London, United Kingdom.
Harriet DowningCentre for Academic Primary Care, NIHR School of Primary Care Research, School of Social and Community Medicine, University of Bristol, Bristol, United Kingdom.
Jan DudleyBristol Royal Hospital for Children, University Hospitals Bristol, NHS Foundation Trust, Bristol, United Kingdom.
William HollingworthSchool of Social and Community Medicine, University of Bristol, Bristol, United Kingdom.
Catherine LislesSouth East Wales Trials Unit (SEWTU), Institute for Translation, Innovation, Methodology and Engagement, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Paul LittlePrimary Care and Population Sciences Division, University of Southampton, Southampton, United Kingdom.
Kathryn O'BrienCochrane Institute of Primary Care & Public Health, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Timothy PicklesSouth East Wales Trials Unit (SEWTU), Institute for Translation, Innovation, Methodology and Engagement, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Kate RumsbyPrimary Care and Population Sciences Division, University of Southampton, Southampton, United Kingdom.
Emma Thomas-JonesSouth East Wales Trials Unit (SEWTU), Institute for Translation, Innovation, Methodology and Engagement, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Judith Van der VoortDepartment of Paediatrics and Child Health, University Hospital of Wales, Cardiff, United Kingdom.
Cherry-Ann WaldronSouth East Wales Trials Unit (SEWTU), Institute for Translation, Innovation, Methodology and Engagement, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Kim HarmanPrimary Care and Population Sciences Division, University of Southampton, Southampton, United Kingdom.
Kerenza HoodSouth East Wales Trials Unit (SEWTU), Institute for Translation, Innovation, Methodology and Engagement, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Christopher C ButlerCochrane Institute of Primary Care & Public Health, School of Medicine, Cardiff University, Cardiff, United Kingdom.
Jonathan A C SterneSchool of Social and Community Medicine, University of Bristol, Bristol, United Kingdom.
University of Bristol · GBCardiff University · GBUniversity of Southampton · GBUniversity Hospital of Wales · GBCochrane · GBKing's College London · GBKleijnen Systematic Reviews (United Kingdom) · GBNorth Bristol NHS Trust · GBPublic Health Wales · GBUniversity Hospitals Bristol NHS Foundation Trust · GBUniversity of Oxford · GB

Funding

Department of Health 08/66/01Department of Health CDF-2009-02-10Department of Health NIHR-RP-02-12-012Medical Research Council MR/K021699/1
6 · The paper itself

Abstract

objectivesTo compare the validity of diagnosis of urinary tract infection (UTI) through urine culture between samples processed in routine health service laboratories and those processed in a research laboratory. POPULATION AND

methodsWe conducted a prospective diagnostic cohort study in 4808 acutely ill children aged <5 years attending UK primary health care. UTI, defined as pure/predominant growth ≥105 CFU/mL of a uropathogen (the reference standard), was diagnosed at routine health service laboratories and a central research laboratory by culture of urine samples. We calculated areas under the receiver-operator curve (AUC) for UTI predicted by pre-specified symptoms, signs and dipstick test results (the "index test"), separately according to whether samples were obtained by clean catch or nappy (diaper) pads.

results251 (5.2%) and 88 (1.8%) children were classified as UTI positive by health service and research laboratories respectively. Agreement between laboratories was moderate (kappa = 0.36; 95% confidence interval [CI] 0.29, 0.43), and better for clean catch (0.54; 0.45, 0.63) than nappy pad samples (0.20; 0.12, 0.28). In clean catch samples, the AUC was lower for health service laboratories (AUC = 0.75; 95% CI 0.69, 0.80) than the research laboratory (0.86; 0.79, 0.92). Values of AUC were lower in nappy pad samples (0.65 [0.61, 0.70] and 0.79 [0.70, 0.88] for health service and research laboratory positivity, respectively) than clean catch samples.

conclusionsThe agreement of microbiological diagnosis of UTI comparing routine health service laboratories with a research laboratory was moderate for clean catch samples and poor for nappy pad samples and reliability is lower for nappy pad than for clean catch samples. Positive results from the research laboratory appear more likely to reflect real UTIs than those from routine health service laboratories, many of which (particularly from nappy pad samples) could be due to contamination. Health service laboratories should consider adopting procedures used in the research laboratory for paediatric urine samples. Primary care clinicians should try to obtain clean catch samples, even in very young children.

Indexed as

Health FacilitiesLaboratoriesArea Under CurveChild, PreschoolCitrobacterCohort StudiesDiagnostic Tests, RoutineEnterobacterEscherichia coliFemaleHumansInfantInfant, NewbornKlebsiellaMaleOdds Ratio

Identifiers

PMID28199403
PMCPMC5310769
OpenAlexW2588689994

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.