ArticleScientific reports2017
Discovery of genes coding for carbohydrate-active enzyme by metagenomic analysis of lignocellulosic biomasses.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.
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Who cites it
34 citing papers in PubMed.
- Genomic and Phenotypic Analysis of Antarctic Marine Cryobacterium sp. PAMC25264.Current microbiology · 2026Article
- Disentangling Gut Bacterial Community Patterns inInsects · 2025Article
- Lignocellulose degradation in bacteria and fungi: cellulosomes and industrial relevance.Frontiers in microbiology · 2025Review
- Meta-analysis of biodynamic (BD) preparations reveal the bacterial population involved in improving soil health, crop yield and quality.Journal, genetic engineering & biotechnology · 2024Article
- Functional and sequence-based metagenomics to uncover carbohydrate-degrading enzymes from composting samples.Applied microbiology and biotechnology · 2023Article
- Role of metagenomics in prospecting novel endoglucanases, accentuating functional metagenomics approach in second-generation biofuel production: a review.Biomass conversion and biorefinery · 2023Review
- Comparative and pangenomic analysis of the genus Streptomyces.Scientific reports · 2022Article
- Metagenomic mining of Indian river confluence reveal functional microbial community with lignocelluloytic potential.3 Biotech · 2022Article
- Comparative analysis of genome-based CAZyme cassette in Antarctic Microbacterium sp. PAMC28756 with 31 other Microbacterium species.Genes & genomics · 2022Article
- Diversity, mechanisms and beneficial features of phosphate-solubilizingFrontiers in plant science · 2022Review
- Enhancing the ethanol production by exploiting a novel metagenomic-derived bifunctional xylanase/β-glucosidase enzyme with improved β-glucosidase activity by a nanocellulose carrier.Frontiers in microbiology · 2022Article
- Discovery of novel carbohydrate degrading enzymes from soda lakes through functional metagenomics.Frontiers in microbiology · 2022Article
- Co-elicitation of lignocelluloytic enzymatic activities and metabolites production in anCurrent research in microbial sciences · 2022Article
- Improved method for the extraction of high-quality DNA from lignocellulosic compost samples for metagenomic studies.Applied microbiology and biotechnology · 2021Article
- Article
- Phylogenomics, CAZyome and core secondary metabolome of Streptomyces albus species.Molecular genetics and genomics : MGG · 2021Article
- Genome-resolved metagenome and metatranscriptome analyses of thermophilic composting reveal key bacterial players and their metabolic interactions.BMC genomics · 2021Article
- Hybrid Genome Assembly for Predicting Functional Potential of a NovelIndian journal of microbiology · 2021Article
- Metagenome-assembled genome of a Chitinophaga sp. and its potential in plant biomass degradation, as well of affiliated Pandoraea and Labrys species.World journal of microbiology & biotechnology · 2021Article
- The chitinolytic activity of the Curtobacterium sp. isolated from field-grown soybean and analysis of its genome sequence.PloS one · 2021Article
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6 authors.
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Abstract
In this study, a high-throughput sequencing approach was applied to discover novel biocatalysts for lignocellulose hydrolysis from three dedicated energy crops, Arundo donax, Eucalyptus camaldulensis and Populus nigra, after natural biodegradation. The microbiomes of the three lignocellulosic biomasses were dominated by bacterial species (approximately 90%) with the highest representation by the Streptomyces genus both in the total microbial community composition and in the microbial diversity related to GH families of predicted ORFs. Moreover, the functional clustering of the predicted ORFs showed a prevalence of poorly characterized genes, suggesting these lignocellulosic biomasses are potential sources of as yet unknown genes. 1.2%, 0.6% and 3.4% of the total ORFs detected in A. donax, E. camaldulensis and P. nigra, respectively, were putative Carbohydrate-Active Enzymes (CAZymes). Interestingly, the glycoside hydrolases abundance in P. nigra (1.8%) was higher than that detected in the other biomasses investigated in this study. Moreover, a high percentage of (hemi)cellulases with different activities and accessory enzymes (mannanases, polygalacturonases and feruloyl esterases) was detected, confirming that the three analyzed samples were a reservoir of diversified biocatalysts required for an effective lignocellulose saccharification.
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