Evidence map›Paper›PMID 28197741›Full record

ArticleJapanese journal of ophthalmology2017

Correlation between the COL4A3, MMP-9, and TIMP-1 polymorphisms and risk of keratoconus.

Ramin Saravani, Davood Yari, Samira Saravani, Farzaneh Hasanian-Langroudi

Abstract read
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In one paragraph

Article in Japanese journal of ophthalmology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Systemic and Ocular Associations of Keratoconus.Expert review of ophthalmology · 2024
    Article
  6. Review
  7. Article
  8. Article
  9. Differential expression ofOncology letters · 2021
    Article
  10. Review
  11. Article
  12. Article
  13. Association ofJournal of ophthalmic & vision research
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ramin SaravaniCellular and Molecular Research Center, Zahedan University of Medical Sciences, Zahedan, Iran.
Davood YariCellular and Molecular Research Center, Zahedan University of Medical Sciences, Zahedan, Iran. Davidyari.85@gmail.com.
Samira SaravaniDepartment of Molecular Genetics, University of Zabol, Zabol, Iran.
Farzaneh Hasanian-LangroudiDepartment of Clinical Biochemistry, School of Medicine, Zahedan University of Medical Sciences, Zahedan, Iran.
Zahedan University of Medical Sciences · IRZabol University · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeKeratoconus (KC) is thinning of the central cornea. Its etiology is unknown, but it may result from degrading of collagen type IV. The major protein in the cornea is collagen. Matrix metalloproteinase-9 (MMP-9) is able to degrade collagen type IV from the basement membrane and extracellular matrix (ECM). MMP-9 enzymatic activity is inhibited by the tissue inhibitor of metalloproteinase-1 (TIMP-1). In the present study, we sought to investigate and evaluate the effects of single nucleotide polymorphisms in COL4A3, MMP-9, and TIMP-1 on the risk of KC in an Iranian population sample.

methodsThis case-control study was performed on 140 KC patients and 150 healthy controls. Genotyping of the COL4A3 rs55703767, MMP-9 rs17576, and TIMP-1 rs6609533 polymorphisms was done using amplification refractory mutation system polymerase chain reaction (ARMS-PCR).

resultsOur findings showed that the rs55703767G/T polymorphism decreased the risk of KC (OR = 0.26, 95% CI = 0.08-0.82, P = 0.022). rs17576A/G, associated with KC and the A allele, was significantly overrepresented in healthy individuals. rs6609533A/G (X-chromosome) increased the risk of KC in females (OR = 2.27, 95% CI = 1.06-4.76, P = 0.036). In males, the allele frequency was not associated with KC risk/protection.

conclusionsThis study indicates that in our population, the COL4A3 rs55703767 polymorphism decreased the risk of KC. However, the TIMP-1 rs6609533 polymorphism was associated with an increased risk of KC.

Indexed as

Polymorphism, GeneticAdolescentAdultAgedAged, 80 and overAutoantigensChildCollagen Type IVCorneaDNAFemaleGenotypeHumansIncidenceIranKeratoconusAutoantigensCollagen Type IVDNAMatrix Metalloproteinase 9Tissue Inhibitor of Metalloproteinase-1type IV collagen alpha3 chainCOL4A3KeratoconusMMP-9PolymorphismTIMP-1

Identifiers

PMID28197741
OpenAlexW2588088301

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.