Evidence map›Paper›PMID 28197153›Full record

ArticleFrontiers in plant science2017

Genetic Dissection of Novel QTLs for Resistance to Leaf Spots and Tomato Spotted Wilt Virus in Peanut (

Manish K Pandey, Hui Wang, Pawan Khera, Manish K Vishwakarma, Sandip M Kale, Albert K Culbreath, C Corley Holbrook, Xingjun Wang, Rajeev K Varshney, Baozhu Guo

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
14.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
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  4. Progress in genetic engineering and genome editing of peanuts: revealing the future of crop improvement.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
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  17. Identification of QTLs for resistance to leaf spots in cultivated peanut (Arachis hypogaea L.) through GWAS analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Manish K PandeyCrop Protection and Management Research Unit, United States Department of Agriculture, Agricultural Research ServiceTifton, GA, USA; International Crops Research Institute for the Semi-Arid TropicsHyderabad, India; Department of Plant Pathology, University of GeorgiaTifton, GA, USA.
Hui WangCrop Protection and Management Research Unit, United States Department of Agriculture, Agricultural Research ServiceTifton, GA, USA; Department of Plant Pathology, University of GeorgiaTifton, GA, USA.
Pawan KheraCrop Protection and Management Research Unit, United States Department of Agriculture, Agricultural Research ServiceTifton, GA, USA; International Crops Research Institute for the Semi-Arid TropicsHyderabad, India; Department of Plant Pathology, University of GeorgiaTifton, GA, USA.
Manish K VishwakarmaInternational Crops Research Institute for the Semi-Arid Tropics Hyderabad, India.
Sandip M KaleInternational Crops Research Institute for the Semi-Arid Tropics Hyderabad, India.
Albert K CulbreathDepartment of Plant Pathology, University of Georgia Tifton, GA, USA.
C Corley HolbrookCrop Genetics and Breeding Research Unit, United States Department of Agriculture, Agricultural Research Service Tifton, GA, USA.
Xingjun WangBiotechnology Research Center, Shandong Academy of Agricultural Sciences Jinan, China.
Rajeev K VarshneyInternational Crops Research Institute for the Semi-Arid Tropics Hyderabad, India.
Baozhu GuoCrop Protection and Management Research Unit, United States Department of Agriculture, Agricultural Research ServiceTifton, GA, USA; Department of Plant Pathology, University of GeorgiaTifton, GA, USA.
International Crops Research Institute for the Semi-Arid Tropics · INAgricultural Research Service · USShandong Academy of Agricultural Sciences · CNUnited States Department of Agriculture · USUniversity of Georgia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peanut is an important crop, economically and nutritiously, but high production cost is a serious challenge to peanut farmers as exemplified by chemical spray to control foliar diseases such as leaf spots and thrips, the vectors of tomato spotted wilt virus (TSWV). The objective of this research was to map the quantitative trait loci (QTLs) for resistance to leaf spots and TSWV in one recombinant inbred line (RIL) mapping population of "Tifrunner × GT-C20" for identification of linked markers for marker-assisted breeding. Here, we report the improved genetic linkage map with 418 marker loci with a marker density of 5.3 cM/loci and QTLs associated with multi-year (2010-2013) field phenotypes of foliar disease traits, including early leaf spot (ELS), late leaf spot (LLS), and TSWV. A total of 42 QTLs were identified with phenotypic variation explained (PVE) from 6.36 to 15.6%. There were nine QTLs for resistance to ELS, 22 QTLs for LLS, and 11 QTLs for TSWV, including six, five, and one major QTLs with PVE higher than 10% for resistance to each disease, respectively. Of the total 42 QTLs, 34 were mapped on the A sub-genome and eight mapped on the B sub-genome suggesting that the A sub-genome harbors more resistance genes than the B sub-genome. This genetic linkage map was also compared with two diploid peanut physical maps, and the overall co-linearity was 48.4% with an average co-linearity of 51.7% for the A sub-genome and 46.4% for the B sub-genome. The identified QTLs associated markers and potential candidate genes will be studied further for possible application in molecular breeding in peanut genetic improvement for disease resistance.

Indexed as

early leaf spot (ELS)late leaf spot (LLS)peanutsquantitative trait locus (QTL)tomato spotted wilt virus (TSWV)

Identifiers

PMID28197153
PMCPMC5281592
OpenAlexW2581165783

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.