Evidence map›Paper›PMID 28195309›Full record

ArticleEvolution; international journal of organic evolution2017

Ploidy tug-of-war: Evolutionary and genetic environments influence the rate of ploidy drive in a human fungal pathogen.

Aleeza C Gerstein, Heekyung Lim, Judith Berman, Meleah A Hickman

Erratum issuedAbstract read
In one paragraph

Article in Evolution; international journal of organic evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Development of a RobustMicroorganisms · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Frontiers in microbiology · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. mSphere · 2020
    Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Aleeza C GersteinDepartment of Genetics, Cell Biology & Development, College of Biological Sciences, University of Minnesota, Minneapolis, Minnesota.
Heekyung LimDepartment of Genetics, Cell Biology & Development, College of Biological Sciences, University of Minnesota, Minneapolis, Minnesota.
Judith BermanDepartment of Genetics, Cell Biology & Development, College of Biological Sciences, University of Minnesota, Minneapolis, Minnesota.
Meleah A HickmanDepartment of Genetics, Cell Biology & Development, College of Biological Sciences, University of Minnesota, Minneapolis, Minnesota.

Funding

Genome Integrity in Candida albicansR01AI062427 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI BERMAN, JUDITH G. · 2005 to 2014
$3.6M
CIHREuropean Research Council 340087NIAID NIH HHS R01 AI062427
6 · The paper itself

Abstract

Variation in baseline ploidy is seen throughout the tree of life, yet the factors that determine why one ploidy level is maintained over another remain poorly understood. Experimental evolution studies using asexual fungal microbes with manipulated ploidy levels intriguingly reveals a propensity to return to the historical baseline ploidy, a phenomenon that we term "ploidy drive." We evolved haploid, diploid, and polyploid strains of the human fungal pathogen Candida albicans under three different nutrient limitation environments to test whether these conditions, hypothesized to select for low ploidy levels, could counteract ploidy drive. Strains generally maintained or acquired smaller genome sizes (measured as total nuclear DNA through flow cytometry) in minimal medium and under phosphorus depletion compared to in a complete medium, while mostly maintained or acquired increased genome sizes under nitrogen depletion. Improvements in fitness often ran counter to changes in genome size; in a number of scenarios lines that maintained their original genome size often increased in fitness more than lines that converged toward diploidy (the baseline ploidy of C. albicans). Combined, this work demonstrates a role for both the environment and genotype in determination of the rate of ploidy drive, and highlights questions that remain about the force(s) that cause genome size variation.

Indexed as

DiploidyHaploidyNutritional Physiological PhenomenaPolyploidyBiological EvolutionCandida albicansGene-Environment InteractionGenome, FungalGenome SizeGenotypeHumansAdaptationchromosomal evolutionfitnessmutationsselection experimentalselection natural

Identifiers

PMID28195309
PMCPMC7035954

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.