Evidence map›Paper›PMID 28195135›Full record

ArticleScientific reports2017

Co-operation, Competition and Crowding: A Discrete Framework Linking Allee Kinetics, Nonlinear Diffusion, Shocks and Sharp-Fronted Travelling Waves.

Stuart T Johnston, Ruth E Baker, D L Sean McElwain, Matthew J Simpson

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Scaling relations for auxin waves.Journal of mathematical biology · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Population dynamics with spatial structure and an Allee effect.Proceedings. Mathematical, physical, and engineering sciences · 2020
    Article
  8. Article
  9. Article
  10. Predicting population extinction in lattice-based birth-death-movement models.Proceedings. Mathematical, physical, and engineering sciences · 2020
    Article
  11. From a discrete model of chemotaxis with volume-filling to a generalized Patlak-Keller-Segel model.Proceedings. Mathematical, physical, and engineering sciences · 2020
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Stuart T JohnstonMathematical Sciences, Queensland University of Technology (QUT), Brisbane, Australia.
Ruth E BakerWolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, United Kingdom.
D L Sean McElwainMathematical Sciences, Queensland University of Technology (QUT), Brisbane, Australia.
Matthew J SimpsonMathematical Sciences, Queensland University of Technology (QUT), Brisbane, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Invasion processes are ubiquitous throughout cell biology and ecology. During invasion, individuals can become isolated from the bulk population and behave differently. We present a discrete, exclusion-based description of the birth, death and movement of individuals. The model distinguishes between individuals that are part of, or are isolated from, the bulk population by imposing different rates of birth, death and movement. This enables the simulation of various co-operative or competitive mechanisms, where there is either a positive or negative benefit associated with being part of the bulk population, respectively. The mean-field approximation of the discrete process gives rise to 22 different classes of partial differential equation, which can include Allee kinetics and nonlinear diffusion. Here we examine the ability of each class of partial differential equation to support travelling wave solutions and interpret the long time behaviour in terms of the individual-level parameters. For the first time we show that the strong Allee effect and nonlinear diffusion can result in shock-fronted travelling waves. We also demonstrate how differences in group and individual motility rates can influence the persistence of a population and provide conditions for the successful invasion of a population.

Indexed as

Competitive BehaviorCooperative BehaviorCrowdingModels, StatisticalAnimalsBrain NeoplasmsCell BiologyCell MovementDiffusionEcologyFibroblastsGliomaHumansKineticsNeoplastic Cells, CirculatingPopulation Dynamics

Identifiers

PMID28195135
PMCPMC5307329

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.