Evidence map›Paper›PMID 28192420›Full record

ArticleNature methods2017

Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.

M Jason de la Cruz, Johan Hattne, Dan Shi, Paul Seidler, Jose Rodriguez, Francis E Reyes, Michael R Sawaya, Duilio Cascio, Simon C Weiss, Sun Kyung Kim and 5 more

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
13.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 187 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Standards for MicroED.Acta crystallographica. Section C, Structural chemistry · 2025
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. An Updated Structure of Oxybutynin Hydrochloride.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  16. Reaching the potential of electron diffraction.Cell reports. Physical science · 2024
    Article
  17. Applying 3D ED/MicroED workflows toward the next frontiers.Acta crystallographica. Section C, Structural chemistry · 2024
    Article
  18. 3D Nanocrystallography and the Imperfect Molecular Lattice.Annual review of physical chemistry · 2024
    Review
  19. Review
  20. Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

M Jason de la CruzHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, Virginia, USA.ORCID http://orcid.org/0000-0002-8573-5406
Johan HattneHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, Virginia, USA.ORCID http://orcid.org/0000-0002-8936-0912
Dan ShiHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, Virginia, USA.
Paul SeidlerHoward Hughes Medical Institute, UCLA-DOE Institute, Departments of Biological Chemistry, Chemistry &Biochemistry, and Molecular Biology Institute, UCLA, Los Angeles, California, USA.
Jose RodriguezHoward Hughes Medical Institute, UCLA-DOE Institute, Departments of Biological Chemistry, Chemistry &Biochemistry, and Molecular Biology Institute, UCLA, Los Angeles, California, USA.
Francis E ReyesHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, Virginia, USA.
Michael R SawayaHoward Hughes Medical Institute, UCLA-DOE Institute, Departments of Biological Chemistry, Chemistry &Biochemistry, and Molecular Biology Institute, UCLA, Los Angeles, California, USA.
Duilio CascioHoward Hughes Medical Institute, UCLA-DOE Institute, Departments of Biological Chemistry, Chemistry &Biochemistry, and Molecular Biology Institute, UCLA, Los Angeles, California, USA.
Simon C WeissDepartment of Structural Biology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Sun Kyung KimDepartment of Structural Biology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Cynthia S HinckDepartment of Structural Biology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Andrew P HinckDepartment of Structural Biology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Guillermo CaleroDepartment of Structural Biology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
David EisenbergHoward Hughes Medical Institute, UCLA-DOE Institute, Departments of Biological Chemistry, Chemistry &Biochemistry, and Molecular Biology Institute, UCLA, Los Angeles, California, USA.
Tamir GonenHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, Virginia, USA.
Howard Hughes Medical Institute · USUniversity of Pittsburgh · US

Funding

Structural Biology of Amyloid DiseaseR01AG029430 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI EISENBERG, DAVID · 2007 to 2016
$3.9M
LIGAND/RECEPTOR INTERACTIONS IN THE TGF BETA SUPERFAMILYR01GM058670 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HINCK, ANDREW P · 1999 to 2017
$3.6M
Structural Studies of RNA Polymerase II Transcription Initiation and ElongationR01GM112686 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO · 2015 to 2024
$2.8M
Structural and Functional Mechanisms of PTH-Receptor SignalingR01DK102495 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO, GARDELLA, THOMAS J · 2014 to 2017
$2.0M
Inhibition of the tumor-promoting effects of TGF-beta in advanced prostate cancerR01CA172886 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HINCK, ANDREW P, SUN, LUZHE · 2013 to 2016
$1.2M
Tau Structures: From Proteopathic to ProtectiveF32NS095661 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SEIDLER, PAUL MATTHEW · 2016 to 2018
$173k
NCI NIH HHS R01 CA172886NIA NIH HHS R01 AG029430NIDDK NIH HHS R01 DK102495NIGMS NIH HHS R01 GM058670NIGMS NIH HHS R01 GM112686NINDS NIH HHS F32 NS095661
6 · The paper itself

Abstract

Traditionally, crystallographic analysis of macromolecules has depended on large, well-ordered crystals, which often require significant effort to obtain. Even sizable crystals sometimes suffer from pathologies that render them inappropriate for high-resolution structure determination. Here we show that fragmentation of large, imperfect crystals into microcrystals or nanocrystals can provide a simple path for high-resolution structure determination by the cryoEM method MicroED and potentially by serial femtosecond crystallography.

Indexed as

Cryoelectron MicroscopyCrystallographyCrystallography, X-RayModels, MolecularProtein ConformationProteinsProteins

Identifiers

PMID28192420
PMCPMC5376236
OpenAlexW2588229658

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.