Evidence map›Paper›PMID 28192292›Full record

ArticleMethods and applications in fluorescence2016

Single molecule optical measurements of orientation and rotations of biological macromolecules.

Deborah Y Shroder, Lisa G Lippert, Yale E Goldman

Open access · greenAbstract read
In one paragraph

Article in Methods and applications in fluorescence, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Torque-generating units of the bacterial flagellar motor are rotary motors.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  10. No hype in hyperspace.Biophysical journal · 2021
    Article
  11. Article
  12. Review
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  14. Article
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  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Deborah Y ShroderDepartment of Biochemistry and Biophysics, Pennsylvania Muscle Institute and Department of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Lisa G LippertDepartment of Biochemistry and Biophysics, Pennsylvania Muscle Institute and Department of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Yale E GoldmanDepartment of Biochemistry and Biophysics, Pennsylvania Muscle Institute and Department of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
University of Pennsylvania · US

Funding

Role of Myosin-l in Membrane Dynamics and TransportP01GM087253 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI SHUMAN, HENRY · 2009 to 2018
$15.3M
Supplemental Application linked to parent grant Structural Dynamics of Molecular Motors, the Cytoskeleton, and the RibosomeR35GM118139 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI YALE E GOLDMAN · 2016 to 2026
$8.3M
Regulation and Mechano-Chemistry of Myosins V and VIP01AR051174 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI HOLZBAUR, ERIKA L · 2004 to 2008
$7.1M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008275 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI WAND, A. JOSHUA · 1988 to 2018
$6.0M
StructuraL Dynamics of Actomyosin MotilityR01GM086352 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GOLDMAN, YALE E · 2008 to 2016
$3.8M
NIAMS NIH HHS P01 AR051174NIGMS NIH HHS P01 GM087253NIGMS NIH HHS R01 GM086352NIGMS NIH HHS R35 GM118139NIGMS NIH HHS T32 GM008275
6 · The paper itself

Abstract

Subdomains of macromolecules often undergo large orientation changes during their catalytic cycles that are essential for their activity. Tracking these rearrangements in real time opens a powerful window into the link between protein structure and functional output. Site-specific labeling of individual molecules with polarized optical probes and measurement of their spatial orientation can give insight into the crucial conformational changes, dynamics, and fluctuations of macromolecules. Here we describe the range of single molecule optical technologies that can extract orientation information from these probes, review the relevant types of probes and labeling techniques, and highlight the advantages and disadvantages of these technologies for addressing specific inquiries.

Indexed as

RotationFluorescence Resonance Energy TransferFluorescent DyesMacromolecular SubstancesOptical ImagingOptical TweezersProtein ConformationProteinsSingle Molecule ImagingFluorescent DyesMacromolecular SubstancesProteins

Identifiers

PMID28192292
PMCPMC5308470
OpenAlexW2551170455

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.