Evidence map›Paper›PMID 28191641›Full record

ArticleThe New phytologist2017

Genetic variation and host-parasite specificity of Striga resistance and tolerance in rice: the need for predictive breeding.

Jonne Rodenburg, Mamadou Cissoko, Nicholas Kayongo, Ibnou Dieng, Jenipher Bisikwa, Runyambo Irakiza, Isaac Masoka, Charles A O Midega, Julie D Scholes

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
11.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 65 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Jonne RodenburgAfrica Rice Center (AfricaRice), 01 BP 4029, Abidjan 01, Côte d'Ivoire.
Mamadou CissokoAfrica Rice Center (AfricaRice), East and Southern Africa, PO Box 33581, Dar es Salaam, Tanzania.
Nicholas KayongoSchool of Agricultural Sciences, Makerere University, PO Box 7062, Kampala, Uganda.
Ibnou DiengAfrica Rice Center (AfricaRice), 01 BP 2551, Bouaké 01, Côte d'Ivoire.
Jenipher BisikwaSchool of Agricultural Sciences, Makerere University, PO Box 7062, Kampala, Uganda.
Runyambo IrakizaAfrica Rice Center (AfricaRice), East and Southern Africa, PO Box 33581, Dar es Salaam, Tanzania.
Isaac MasokaDepartment of Plant Sciences, Kenyatta University, PO Box 43844-00100, Nairobi, Kenya.
Charles A O MidegaInternational Centre of Insect Physiology and Ecology (ICIPE), PO Box 30, Mbita, 40305, Kenya.
Julie D ScholesDepartment of Animal and Plant Sciences, University of Sheffield, Sheffield, S10 2TN, UK.
Africa Rice Center · BJMakerere University · UGUniversity of Sheffield · GBInternational Centre of Insect Physiology and Ecology · KEKenyatta University · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The parasitic weeds Striga asiatica and Striga hermonthica cause devastating yield losses to upland rice in Africa. Little is known about genetic variation in host resistance and tolerance across rice genotypes, in relation to virulence differences across Striga species and ecotypes. Diverse rice genotypes were phenotyped for the above traits in S. asiatica- (Tanzania) and S. hermonthica-infested fields (Kenya and Uganda) and under controlled conditions. New rice genotypes with either ecotype-specific or broad-spectrum resistance were identified. Resistance identified in the field was confirmed under controlled conditions, providing evidence that resistance was largely genetically determined. Striga-resistant genotypes contributed to yield security under Striga-infested conditions, although grain yield was also determined by the genotype-specific yield potential and tolerance. Tolerance, the physiological mechanism mitigating Striga effects on host growth and physiology, was unrelated to resistance, implying that any combination of high, medium or low levels of these traits can be found across rice genotypes. Striga virulence varies across species and ecotypes. The extent of Striga-induced host damage results from the interaction between parasite virulence and genetically determined levels of host-plant resistance and tolerance. These novel findings support the need for predictive breeding strategies based on knowledge of host resistance and parasite virulence.

Indexed as

Adaptation, PhysiologicalBreedingGenetic VariationHost-Parasite InteractionsAfricaBiomassCrops, AgriculturalDisease ResistanceEcosystemEcotypeGenotypeOryzaPhenotypePhotosynthesisPlant DiseasesQuantitative Trait, Heritablegrain yieldOryza glaberrimaOryza sativaphotosynthesispost-attachment resistancepredictive breedingwitchweed

Identifiers

PMID28191641
PMCPMC5412873
OpenAlexW2588463351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.