ArticleMagnetic resonance imaging2017
An improved FSL-FIRST pipeline for subcortical gray matter segmentation to study abnormal brain anatomy using quantitative susceptibility mapping (QSM).
Article in Magnetic resonance imaging, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
22 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.Academic radiology · 2019Pooled it
- Brain metabolic-functional (de)coupling from health to glioma dysfunction.Communications biology · 2025Article
- Individual-level metabolic connectivity from dynamic [European journal of nuclear medicine and molecular imaging · 2025Article
- Impact of processing and analysis methodology on thalamic susceptibility assessment in multiple sclerosis.PloS one · 2025Article
- Recommended implementation of quantitative susceptibility mapping for clinical research in the brain: A consensus of the ISMRM electro-magnetic tissue properties study group.Magnetic resonance in medicine · 2024Article
- "Back to Braak": Role of Nucleus Reuniens and Subcortical Pathways in Alzheimer's Disease Progression.The journal of prevention of Alzheimer's disease · 2024Article
- Convergent imaging-transcriptomic evidence for disturbed iron homeostasis in Gilles de la Tourette syndrome.medRxiv : the preprint server for health sciences · 2023Article
- In vivo multi-parameter mapping of the habenula using MRI.Scientific reports · 2023Article
- DBSegment: Fast and robust segmentation of deep brain structures considering domain generalization.Human brain mapping · 2023Article
- Subcortical Cognition: The Fruit Below the Rind.Annual review of neuroscience · 2022Review
- Automated Differentiation of Atypical Parkinsonian Syndromes Using Brain Iron Patterns in Susceptibility Weighted Imaging.Diagnostics (Basel, Switzerland) · 2022Article
- A Preliminary Study of Alterations in Iron Disposal and Neural Activity in Ischemic Stroke.BioMed research international · 2022Article
- A Robust and Accurate Deep-learning-based Method for the Segmentation of Subcortical Brain: Cross-dataset Evaluation of Generalization Performance.Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine · 2021Article
- Decreasing brain iron in multiple sclerosis: The difference between concentration and content in iron MRI.Human brain mapping · 2021Article
- Implicit associative learning relates to basal ganglia gray matter microstructure in young and older adults.Behavioural brain research · 2021Article
- Magnetic susceptibility imaging of human habenula at 3 T.Scientific reports · 2020Article
- Accuracy of automated amygdala MRI segmentation approaches in Huntington's disease in the IMAGE-HD cohort.Human brain mapping · 2020Article
- Multi-atlas tool for automated segmentation of brain gray matter nuclei and quantification of their magnetic susceptibility.NeuroImage · 2019Article
- Characterization of Iron Accumulation in Deep Gray Matter in Myotonic Dystrophy Type 1 and 2 Using Quantitative Susceptibility Mapping and R2Frontiers in neurology · 2019Article
- Changes of deep gray matter magnetic susceptibility over 2 years in multiple sclerosis and healthy control brain.NeuroImage. Clinical · 2018Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
10 authors.
Funding
Abstract
Accurate and robust segmentation of subcortical gray matter (SGM) nuclei is required in many neuroimaging applications. FMRIB's Integrated Registration and Segmentation Tool (FIRST) is one of the most popular software tools for automated subcortical segmentation based on T
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.