Evidence map›Paper›PMID 28188205›Full record

ArticleApplied and environmental microbiology2017

Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions.

Yujie Men, Ke Yu, Jacob Bælum, Ying Gao, Julien Tremblay, Emmanuel Prestat, Ben Stenuit, Susannah G Tringe, Janet Jansson, Tong Zhang and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 35 citations in OpenAlex.

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  8. Research progress in bioremediation of petroleum pollution.Environmental science and pollution research international · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Yujie MenDepartment of Civil and Environmental Engineering, University of California, Berkeley, Berkeley, California, USA ymen2@illinois.edu.
Ke YuDepartment of Civil and Environmental Engineering, University of California, Berkeley, Berkeley, California, USA.
Jacob BælumEarth Science Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Ying GaoDepartment of Civil and Environmental Engineering, University of California, Berkeley, Berkeley, California, USA.
Julien TremblayNational Research Council Canada, Montreal, Quebec, Canada.
Emmanuel PrestatEarth Science Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Ben StenuitDepartment of Civil and Environmental Engineering, University of California, Berkeley, Berkeley, California, USA.
Susannah G TringeDOE Joint Genome Institute, Walnut Creek, California, USA.
Janet JanssonEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, USA.
Tong ZhangThe University of Hong Kong, Hong Kong.
Lisa Alvarez-CohenDepartment of Civil and Environmental Engineering, University of California, Berkeley, Berkeley, California, USA.
University of California, Berkeley · USLawrence Berkeley National Laboratory · USJoint Genome Institute · USNational Research Council Canada · CAPacific Northwest National Laboratory · USUniversity of Hong Kong · HK

Funding

Training CoreP42ES004705 · NIEHS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MCHALE, CLIONA · 1987 to 2025
$74.6M
Metabolic Interactions Supporting Effective TCE Bioremediation under Various BiogR01ES024255 · NIEHS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ALVAREZ-COHEN, LISA · 2014 to 2017
$762k
Genome Sequencer FLXS10RR029668 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI NGAI, JOHN J. · 2010 to 2010
$623k
Illumina Sequencer to Facilitate Functional Genomics at BerkeleyS10RR027303 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI TAYLOR, JOHN W. · 2010 to 2010
$500k
NCRR NIH HHS S10 RR027303NCRR NIH HHS S10 RR029668NIEHS NIH HHS P42 ES004705NIEHS NIH HHS R01 ES024255
6 · The paper itself

Abstract

The aim of this study is to obtain a systems-level understanding of the interactions between

Indexed as

Gene Expression ProfilingMetagenomicsMicrobial ConsortiaBacteriaBiodegradation, EnvironmentalBiosynthetic PathwaysChloroflexiCorrinoidsGenome, BacterialHalogenationTrichloroethyleneVeillonellaceaeVitamin B 12CorrinoidsTrichloroethyleneVitamin B 12corrinoidDehalococcoidesmetagenomemetatranscriptomereductive dechlorinationVeillonellaceae

Identifiers

PMID28188205
PMCPMC5377501
OpenAlexW2586579175

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.