Evidence map›Paper›PMID 28188148›Full record

ArticleJournal of lipid research2017

Analysis of sphingolipids in human corneal fibroblasts from normal and keratoconus patients.

Hui Qi, Shrestha Priyadarsini, Sarah E Nicholas, Akhee Sarker-Nag, Jeremy Allegood, Charles E Chalfant, Nawajes A Mandal, Dimitrios Karamichos

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 29 citations in OpenAlex.

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  16. International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Hui QiDepartments of Ophthalmology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104; Dean McGee Eye Institute, Oklahoma City, OK 73104.
Shrestha PriyadarsiniDepartments of Ophthalmology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104; Dean McGee Eye Institute, Oklahoma City, OK 73104.
Sarah E NicholasDepartments of Ophthalmology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104; Dean McGee Eye Institute, Oklahoma City, OK 73104.
Akhee Sarker-NagDepartments of Ophthalmology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104; Dean McGee Eye Institute, Oklahoma City, OK 73104.
Jeremy AllegoodDepartment of Biochemistry and Molecular Biology, Virginia Commonwealth University School of Medicine, Richmond, VA 23249.
Charles E ChalfantDepartment of Biochemistry and Molecular Biology, Virginia Commonwealth University School of Medicine, Richmond, VA 23249; Research and Development, Hunter Holmes McGuire Veterans Administration Medical Center, Richmond, VA 23249 and VCU Massey Cancer Center, VCU Institute of Molecular Medicine, and VCU Johnson Center, Virginia Commonwealth University, Richmond, VA 23298.
Nawajes A MandalDepartments of Ophthalmology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104; Dean McGee Eye Institute, Oklahoma City, OK 73104; Physiology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104; Cell Biology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104. Electronic address: nmandal@uthsc.edu.
Dimitrios KaramichosDepartments of Ophthalmology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104; Dean McGee Eye Institute, Oklahoma City, OK 73104; Physiology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104; Cell Biology, University of Oklahoma Health Sciences Center (OUHSC), Oklahoma City, OK 73104. Electronic address: Dimitrios-Karamichos@ouhsc.edu.
Dean McGee Eye Institute · USUniversity of Oklahoma Health Sciences Center · USVirginia Commonwealth University · US

Funding

Virus Vector Shared ResourceP30CA016059 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Kim Felder Rhoads · 1985 to 2026
$51.0M
P30-CENTER CORE GRANT FOR VISION RESEARCHP30EY021725 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Michelle C Callegan, MICHAEL H ELLIOTT · 2011 to 2026
$10.5M
The functional role of the cPLA2alpha/C1P interaction in sepsis resolutionR01HL125353 · NHLBI · VIRGINIA COMMONWEALTH UNIVERSITY · PI BROWN, RHODERICK E, CHALFANT, CHARLES E. · 2014 to 2018
$4.0M
Transplantation of a self-assembled corneal substituteR01EY020886 · NEI · SCHEPENS EYE RESEARCH INSTITUTE · PI KARAMICHOS, DIMITRIOS, ZIESKE, JAMES D · 2011 to 2014
$1.9M
Sphingolipid Metabolism and Signaling in the RetinaR01EY022071 · NEI · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI MANDAL, NAWAJES · 2012 to 2016
$1.8M
Regulation of caspase 9 RNA splicing in NSCLC cancerR01CA154314 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHALFANT, CHARLES E. · 2011 to 2014
$1.2M
Documentation of Novel Keratoconus Markers: In Vitro and In VivoR01EY023568 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI KARAMICHOS, DIMITRIOS · 2013 to 2015
$1.1M
AB SCIEX 5500 QTRAP Mass Spectrometer for Lipidomics and Metabolomics ResearchS10OD010641 · OD · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHALFANT, CHARLES E. · 2012 to 2012
$578k
Sphingolipid signaling in corneal wound healing and fibrosisR21EY025256 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI KARAMICHOS, DIMITRIOS, MANDAL, NAWAJES · 2015 to 2016
$429k
The role of the C1P/cPLA2alpha interaction in anaphylaxisR21AI109068 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHALFANT, CHARLES E. · 2014 to 2015
$419k
The role of RNA splicing in non-small cell lung cancerI01BX001792 · VA · VA VETERANS ADMINISTRATION HOSPITAL · PI CHALFANT, CHARLES E. · 2013 to 2024
–
BLRD VA I01 BX001792NCI NIH HHS P30 CA016059NCI NIH HHS R01 CA154314NEI NIH HHS P30 EY021725NEI NIH HHS R01 EY020886NEI NIH HHS R01 EY022071NEI NIH HHS R01 EY023568NEI NIH HHS R21 EY025256NHLBI NIH HHS R01 HL125353NIAID NIH HHS R21 AI109068NIH HHS S10 OD010641
6 · The paper itself

Abstract

The pathophysiology of human keratoconus (KC), a bilateral progressive corneal disease leading to protrusion of the cornea, stromal thinning, and scarring, is not well-understood. In this study, we investigated a novel sphingolipid (SPL) signaling pathway through which KC may be regulated. Using human corneal fibroblasts (HCFs) and human KC cells (HKCs), we examined the SPL pathway modulation. Both cell types were stimulated by the three transforming growth factor (TGF)-β isoforms: TGF-β1 (T1), TGF-β2 (T2), and TGF-β3 (T3). All samples were analyzed using lipidomics and real-time PCR. Our data showed that HKCs have increased levels of signaling SPLs, ceramide (Cer), and sphingosine 1-phosphate (S1P). Treatment with T1 reversed the increase in Cer in HKCs and treatment with T3 reversed the increase in S1P.

Indexed as

Cell LineCeramidesCorneaFibroblastsFingolimod HydrochlorideHumansKeratoconusLysophospholipidsRNA, MessengerSignal TransductionSphingolipidsSphingosineTransforming Growth Factor beta1Transforming Growth Factor beta2Transforming Growth Factor beta3CeramidesFingolimod HydrochlorideLysophospholipidsRNA, MessengerSphingolipidsSphingosinesphingosine 1-phosphateTransforming Growth Factor beta1Transforming Growth Factor beta2Transforming Growth Factor beta3cornealipidomicstransforming growth factor-β

Identifiers

PMID28188148
PMCPMC5392739
OpenAlexW2586232657

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.