Evidence map›Paper›PMID 28186874›Full record

ArticleeLife2017

Spontaneous activation of visual pigments in relation to openness/closedness of chromophore-binding pocket.

Wendy Wing Sze Yue, Rikard Frederiksen, Xiaozhi Ren, Dong-Gen Luo, Takahiro Yamashita, Yoshinori Shichida, M Carter Cornwall, King-Wai Yau

Open access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. E122Q rhodopsin: pigment microspectrophotometry, photoreceptor light responses, and bleaching adaptation.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2026
    Article
  2. Dark continuous noise from visual pigment as a major mechanism underlying rod-cone difference in light sensitivity.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  10. Dark noise and retinal degeneration from D190N-rhodopsin.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Article
  12. Evolution of nonspectral rhodopsin function at high altitudes.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Adaptation of cone pigments found in green rods for scotopic vision through a single amino acid mutation.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Wendy Wing Sze YueSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, United States.
Rikard FrederiksenDepartment of Physiology and Biophysics, Boston University School of Medicine, Boston, United States.
Xiaozhi RenSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, United States.
Dong-Gen LuoState Key Laboratory of Membrane Biology, Peking University, Beijing, China.
Takahiro YamashitaDepartment of Biophysics, Graduate School of Science, Kyoto University, Kyoto, Japan.
Yoshinori ShichidaDepartment of Biophysics, Graduate School of Science, Kyoto University, Kyoto, Japan.
M Carter CornwallDepartment of Physiology and Biophysics, Boston University School of Medicine, Boston, United States.
King-Wai YauSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, United States.ORCID 0000-0001-8880-3091
Johns Hopkins University · USBoston University · USKyoto University · JPPeking University · CN

Funding

VISUAL TRANSDUCTION IN RETINAL PHOTORECEPTORSR01EY006837 · NEI · JOHNS HOPKINS UNIVERSITY · PI KING-WAI YAU · 1987 to 2026
$8.5M
Spectral & Metabolic Basis of Visual ResponsesR01EY001157 · NEI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CORNWALL, M CARTER · 1985 to 2020
$8.3M
VISUAL TRANSDUCTION IN RETINAL PHOTORECEPTORSR37EY006837 · NEI · JOHNS HOPKINS UNIVERSITY · PI YAU, KING-WAI · 1992 to 2002
$822k
SPECIFICITY OF LOCAL CIRCUITS IN PRIMARY VISUAL CORTEXF32EY006837 · NEI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI YABUTA KIDA, NEUSA H · 1998 to 1999
–
Howard Hughes Medical InstituteNEI NIH HHS F32 EY006837NEI NIH HHS R01 EY001157NEI NIH HHS R01 EY006837NEI NIH HHS R37 EY006837
6 · The paper itself

Abstract

Visual pigments can be spontaneously activated by internal thermal energy, generating noise that interferes with real-light detection. Recently, we developed a physicochemical theory that successfully predicts the rate of spontaneous activity of representative rod and cone pigments from their peak-absorption wavelength (λ

Indexed as

AnimalsBinding SitesChemical PhenomenaMiceRetinal Cone Photoreceptor CellsRetinal PigmentsRetinal Rod Photoreceptor CellsRetinal Pigmentsmouseneuroscienceretinal photoreceptorsspontaneous excitationvisionvisual pigment

Identifiers

PMID28186874
PMCPMC5302883
OpenAlexW2586913977

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.