Evidence map›Paper›PMID 28186093›Full record

ArticleNature communications2017

Conformational changes in intact dengue virus reveal serotype-specific expansion.

Xin-Xiang Lim, Arun Chandramohan, Xin Ying Elisa Lim, Nirmalya Bag, Kamal Kant Sharma, Melissa Wirawan, Thorsten Wohland, Shee-Mei Lok, Ganesh S Anand

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. The role of antibody-dependent enhancement in dengue vaccination.Tropical diseases, travel medicine and vaccines · 2024
    Article
  7. Article
  8. Article
  9. Interpretation of Hydrogen/Deuterium Exchange Mass Spectrometry.Journal of the American Society for Mass Spectrometry · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. The effect of temperature on dengue virus transmission byFrontiers in cellular and infection microbiology · 2023
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Xin-Xiang LimDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore.
Arun ChandramohanDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore.
Xin Ying Elisa LimDuke-National University of Singapore Graduate Medical School, 8 College Road, Singapore 169857, Singapore.
Nirmalya BagDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore.
Kamal Kant SharmaDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore.
Melissa WirawanDuke-National University of Singapore Graduate Medical School, 8 College Road, Singapore 169857, Singapore.
Thorsten WohlandDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore.ORCID 0000-0002-0148-4321
Shee-Mei LokDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore.
Ganesh S AnandDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore.
National University of Singapore · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dengue virus serotype 2 (DENV2) alone undergoes structural expansion at 37 °C (associated with host entry), despite high sequence and structural homology among the four known serotypes. The basis for this differential expansion across strains and serotypes is unknown and necessitates mapping of the dynamics of dengue whole viral particles to describe their coordinated motions and conformational changes when exposed to host-like environments. Here we capture the dynamics of intact viral particles of two serotypes, DENV1 and DENV2, by amide hydrogen/deuterium exchange mass spectrometry (HDXMS) and time resolved Förster Resonance Energy Transfer. Our results show temperature-dependent dynamics hotspots on DENV2 and DENV1 particles with DENV1 showing expansion at 40 °C but not at 37 °C. HDXMS measurement of virion dynamics in solution offers a powerful approach to identify potential epitopes, map virus-antibody complex structure and dynamics, and test effects of multiple host-specific perturbations on viruses and virus-antibody complexes.

Indexed as

Molecular ConformationTemperatureAmino Acid SequenceAntibodies, ViralDengueDengue VirusDeuterium Exchange MeasurementHost-Pathogen InteractionsHumansModels, MolecularProtein ConformationSerogroupViral Envelope ProteinsVirionAntibodies, ViralViral Envelope Proteins

Identifiers

PMID28186093
PMCPMC5309819
OpenAlexW2586350104

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.