ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2017
Association mapping utilizing diverse barley lines reveals net form net blotch seedling resistance/susceptibility loci.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 57 citations in OpenAlex.
- Haplotype-based nested association mapping for net form net blotch response in Australian barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Novel resistance loci against Pyrenophora teres f. teres map to chromosomes 3H and 6H of barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Genome-wide association mapping of loci conferring all-stage and high-temperature adult-plant resistance to stripe rust in a global spring barley collection.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Mining the Australian Grains Gene Bank for Rust Resistance in Barley.International journal of molecular sciences · 2023Article
- Genome-wide association mapping highlights candidate genes and immune genotypes for net blotch and powdery mildew resistance in barley.Computational and structural biotechnology journal · 2023Article
- Wild barley (Hordeum spontaneum) and landraces (Hordeum vulgare) from Turkey contain an abundance of novel Rhynchosporium commune resistance loci.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Association mapping reveals a reciprocal virulence/avirulence locus within diverse US Pyrenophora teres f. maculata isolates.BMC genomics · 2022Article
- A novel locus conferring resistance toFrontiers in plant science · 2022Article
- Genome-wide association mapping of Pyrenophora teres f. maculata and Pyrenophora teres f. teres resistance loci utilizing natural Turkish wild and landrace barley populations.G3 (Bethesda, Md.) · 2021Article
- QTL mapping of web blotch resistance in peanut by high-throughput genome-wide sequencing.BMC plant biology · 2020Article
- Identification of quantitative trait loci for net form net blotch resistance in contemporary barley breeding germplasm from the USA using genome-wide association mapping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- GWAS: Fast-forwarding gene identification and characterization in temperate Cereals: lessons from Barley - A review.Journal of advanced research · 2020Review
- Research advances in the Pyrenophora teres-barley interaction.Molecular plant pathology · 2020Review
- The BarleyFrontiers in genetics · 2020Article
- Genetic analysis of a worldwide barley collection for resistance to net form of net blotch disease (Pyrenophora teres f. teres).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019Article
- SNPs associated with barley resistance to isolates of Pyrenophora teres f. teres.BMC genomics · 2019Article
- Genebank genomics highlights the diversity of a global barley collection.Nature genetics · 2019Article
- Resistance to Rhynchosporium commune in a collection of European spring barley germplasm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- Reference Assembly and Annotation of theG3 (Bethesda, Md.) · 2018Article
- Identification of quantitative trait loci associated with resistance to net form net blotch in a collection of Nordic barley germplasm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
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Authors and funding
3 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageA diverse collection of barley lines was phenotyped with three North American Pyrenophora teres f. teres isolates and association analyses detected 78 significant marker-trait associations at 16 genomic loci. Pyrenophora teres f. teres is a necrotrophic fungal pathogen and the causal agent of the economically important foliar disease net form net blotch (NFNB) of barley. The deployment of effective and durable resistance against P. teres f. teres has been hindered by the complexity of quantitative resistance and susceptibility. Several bi-parental mapping populations have been used to identify QTL associated with NFNB disease on all seven barley chromosomes. Here, we report the first genome-wide association study (GWAS) to detect marker-trait associations for resistance or susceptibility to P. teres f. teres. Geographically diverse barley genotypes from a world barley core collection (957) were genotyped with the Illumina barley iSelect chip and phenotyped with three P. teres f. teres isolates collected in two geographical regions of the USA (15A, 6A and LDNH04Ptt19). The best of nine regression models tested were identified for each isolate and used for association analysis resulting in the identification of 78 significant marker-trait associations (MTA; -log10p value >3.0). The MTA identified corresponded to 16 unique genomic loci as determined by analysis of local linkage disequilibrium between markers that did not meet a correlation threshold of R
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.