Evidence map›Paper›PMID 28184497›Full record

ArticleJournal of experimental botany2017

Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.

Ana Ortiz-Espín, Raquel Iglesias-Fernández, Aingeru Calderón, Pilar Carbonero, Francisca Sevilla, Ana Jiménez

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. ThioredoxinAntioxidants (Basel, Switzerland) · 2021
    Article
  12. Decreased Levels of ThioredoxinInternational journal of molecular sciences · 2021
    Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. MitochondrialAntioxidants (Basel, Switzerland) · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ana Ortiz-EspínDepartamento de Biología del Estrés y Patología Vegetal, CEBAS-CSIC, Campus Universitario de Espinardo, 30100-Murcia, Spain.
Raquel Iglesias-FernándezCentro de Biotecnología y Genómica de Plantas (CBGP; UPM-INIA), Campus de Montegancedo, Universidad Politécnica de Madrid, Pozuelo de Alarcón, 28223-Madrid, Spain.
Aingeru CalderónDepartamento de Biología del Estrés y Patología Vegetal, CEBAS-CSIC, Campus Universitario de Espinardo, 30100-Murcia, Spain.
Pilar CarboneroCentro de Biotecnología y Genómica de Plantas (CBGP; UPM-INIA), Campus de Montegancedo, Universidad Politécnica de Madrid, Pozuelo de Alarcón, 28223-Madrid, Spain.
Francisca SevillaDepartamento de Biología del Estrés y Patología Vegetal, CEBAS-CSIC, Campus Universitario de Espinardo, 30100-Murcia, Spain.
Ana JiménezDepartamento de Biología del Estrés y Patología Vegetal, CEBAS-CSIC, Campus Universitario de Espinardo, 30100-Murcia, Spain.
Centro de Edafología y Biología Aplicada del Segura · ESUniversidad Politécnica de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondrial thioredoxin-o (AtTrxo1) was characterized and its expression examined in different organs of Arabidopsis thaliana. AtTrxo1 transcript levels were particularly high in dry seeds and cotyledons where they reached a maximum 36 h after imbibition with water, coinciding with 50% germination. Expression was lower in seeds germinating in 100 mM NaCl. To gain insight into the transcriptional regulation of the AtTrxo1 gene, a phylogenomic analysis was coupled with the screening of an arrayed library of Arabidopsis transcription factors in yeast. The basic leucine zipper AtbZIP9 and the zinc finger protein AZF2 were identified as putative transcriptional regulators. Transcript regulation of AtbZIP9 and AtAFZ2 during germination was compatible with the proposed role in transcriptional regulation of AtTrxo1. Transient over-expression of AtbZIP9 and AtAZF2 in Nicotiana benthamiana leaves demonstrated an activation effect of AtbZIP9 and a repressor effect of AtAZF2 on AtTrxo1 promoter-driven reporter expression. Although moderate concentrations of salt delayed germination in Arabidopsis wild-type seeds, those of two different AtTrxo1 knock-out mutants germinated faster and accumulated higher H2O2 levels than the wild-type. All these data indicate that AtTrxo1 has a role in redox homeostasis during seed germination under salt conditions.

Indexed as

Gene Expression Regulation, PlantGerminationSalinityArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsSeedsThioredoxinsArabidopsis ProteinsAZF protein, ArabidopsisBasic-Leucine Zipper Transcription FactorsbZip9 protein, ArabidopsisDNA-Binding ProteinsThioredoxinsTrxo1 protein, ArabidopsisArabidopsis thalianaAtTrxo1 gene expressionAtTrxo gene familygerminationROS homeostasissaline conditionstranscriptional regulation

Identifiers

PMID28184497
PMCPMC5441863
OpenAlexW2587599134

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.