Evidence map›Paper›PMID 28180322›Full record

ArticleNucleic acids research2017

A specific dsRNA-binding protein complex selectively sequesters endogenous inverted-repeat siRNA precursors and inhibits their processing.

Thomas Montavon, Yerim Kwon, Aude Zimmermann, Philippe Hammann, Timothée Vincent, Valérie Cognat, Fabrice Michel, Patrice Dunoyer

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Recent Advances in Plant Gene Silencing Methods.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Efficient Detection of Long dsRNAFrontiers in plant science · 2018
    Article
  14. Article
  15. Article
  16. A complex ofRNA (New York, N.Y.) · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Thomas MontavonUniversité de Strasbourg, CNRS, IBMP UPR 2357, F-67000 Strasbourg, France.
Yerim KwonUniversité de Strasbourg, CNRS, IBMP UPR 2357, F-67000 Strasbourg, France.
Aude ZimmermannUniversité de Strasbourg, CNRS, IBMP UPR 2357, F-67000 Strasbourg, France.
Philippe HammannUniversité de Strasbourg, CNRS, IBMC FRC1589, Plateforme Protéomique Strasbourg - Esplanade, F-67000 Strasbourg, France.
Timothée VincentUniversité de Strasbourg, CNRS, IBMP UPR 2357, F-67000 Strasbourg, France.
Valérie CognatUniversité de Strasbourg, CNRS, IBMP UPR 2357, F-67000 Strasbourg, France.
Fabrice MichelUniversité de Strasbourg, CNRS, IBMP UPR 2357, F-67000 Strasbourg, France.
Patrice DunoyerUniversité de Strasbourg, CNRS, IBMP UPR 2357, F-67000 Strasbourg, France.
Institut de Biologie Moléculaire des Plantes · FRCentre National de la Recherche Scientifique · FRUniversité de Strasbourg · FRTransgene (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In plants, several dsRNA-binding proteins (DRBs) have been shown to play important roles in various RNA silencing pathways, mostly by promoting the efficiency and/or accuracy of Dicer-like proteins (DCL)-mediated small RNA production. Among the DRBs encoded by the Arabidopsis genome, we recently identified DRB7.2 whose function in RNA silencing was unknown. Here, we show that DRB7.2 is specifically involved in siRNA production from endogenous inverted-repeat (endoIR) loci. This function requires its interacting partner DRB4, the main cofactor of DCL4 and is achieved through specific sequestration of endoIR dsRNA precursors, thereby repressing their access and processing by the siRNA-generating DCLs. The present study also provides multiple lines of evidence showing that DRB4 is partitioned into, at least, two distinct cellular pools fulfilling different functions, through mutually exclusive binding with either DCL4 or DRB7.2. Collectively, these findings revealed that plants have evolved a specific DRB complex that modulates selectively the production of endoIR-siRNAs. The existence of such a complex and its implication regarding the still elusive biological function of plant endoIR-siRNA will be discussed.

Indexed as

ArabidopsisArabidopsis ProteinsInverted Repeat SequencesMultiprotein ComplexesPlants, Genetically ModifiedRibonuclease IIIRNA-Binding ProteinsRNA InterferenceRNA, PlantRNA PrecursorsRNA Processing, Post-TranscriptionalRNA, Small InterferingArabidopsis ProteinsDCL4 protein, ArabidopsisDRB4 protein, ArabidopsisDRB7.2 protein, ArabidopsisMultiprotein ComplexesRibonuclease IIIRNA-Binding ProteinsRNA, PlantRNA PrecursorsRNA, Small Interfering

Identifiers

PMID28180322
PMCPMC5388410
OpenAlexW2565664457

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.