Evidence map›Paper›PMID 28179977›Full record

ReviewComputational and structural biotechnology journal2017

Programmable Genome Editing Tools and their Regulation for Efficient Genome Engineering.

Tuhin Kumar Guha, Alvan Wai, Georg Hausner

Open access · goldAbstract readReview
In one paragraph

Review in Computational and structural biotechnology journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 104 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. In Silico Design of gRNA for CRISPR/Cas9-Mediated Gene Knockout.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  6. Review
  7. Review
  8. Review
  9. Mobile and Self-Sustained Data Storage in an Extremophile Genomic DNA.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  10. The mitogenomes ofFrontiers in microbiology · 2023
    Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. TALENs-an indispensable tool in the era of CRISPR: a mini review.Journal, genetic engineering & biotechnology · 2021
    Review
  17. Review
  18. Review
  19. Decoupling Growth and Protein Production in CHO Cells: A Targeted Approach.Frontiers in bioengineering and biotechnology · 2021
    Article
  20. The Mitogenomes ofFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tuhin Kumar GuhaDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba R3T2N2, Canada.
Alvan WaiDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba R3T2N2, Canada.
Georg HausnerDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba R3T2N2, Canada.
University of Manitoba · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Targeted genome editing has become a powerful genetic tool for studying gene function or for modifying genomes by correcting defective genes or introducing genes. A variety of reagents have been developed in recent years that can generate targeted double-stranded DNA cuts which can be repaired by the error-prone, non-homologous end joining repair system or via the homologous recombination-based double-strand break repair pathway provided a suitable template is available. These genome editing reagents require components for recognizing a specific DNA target site and for DNA-cleavage that generates the double-stranded break. In order to reduce potential toxic effects of genome editing reagents, it might be desirable to control the in vitro or in vivo activity of these reagents by incorporating regulatory switches that can reduce off-target activities and/or allow for these reagents to be turned on or off. This review will outline the various genome editing tools that are currently available and describe the strategies that have so far been employed for regulating these editing reagents. In addition, this review will examine potential regulatory switches/strategies that can be employed in the future in order to provide temporal control for these reagents.

Indexed as

CRISPR/Cas9Hammerhead ribozymeMeganucleaseRegulatory switchTALENZinc finger nuclease

Identifiers

PMID28179977
PMCPMC5279741
OpenAlexW2574251228

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.