Evidence map›Paper›PMID 28179533›Full record

ArticleJournal of virology2017

A Point Mutation in the RNA-Binding Domain of Human Parainfluenza Virus Type 2 Nucleoprotein Elicits Abnormally Enhanced Polymerase Activity.

Yusuke Matsumoto, Keisuke Ohta, Daniel Kolakofsky, Machiko Nishio

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  7. Negative and ambisense RNA virus ribonucleocapsids: more than protective armor.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  8. The bipartite promoter ofJournal of virology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Yusuke MatsumotoDepartment of Microbiology, School of Medicine, Wakayama Medical University, Wakayama, Japan ymatsu@wakayama-med.ac.jp.
Keisuke OhtaDepartment of Microbiology, School of Medicine, Wakayama Medical University, Wakayama, Japan.
Daniel KolakofskyDepartment of Microbiology and Molecular Medicine, University of Geneva School of Medicine, Geneva, Switzerland.
Machiko NishioDepartment of Microbiology, School of Medicine, Wakayama Medical University, Wakayama, Japan.
Wakayama Medical University · JPUniversity of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genome RNA of human parainfluenza virus type 2 (hPIV2) that acts as the template for the polymerase complex is entirely encapsidated by the nucleoprotein (NP). Recently, the crystal structure of NP of PIV5, a virus closely related to hPIV2, was resolved in association with RNA. Ten amino acids that contact the bound RNA were identified and are strictly conserved between PIV5 and hPIV2 NP. Mutation of hPIV2 NP Q202 (which contacts a base rather than the RNA backbone) to various amino acids resulted in an over 30-fold increase of polymerase activity as evidenced by a minireplicon assay, even though the RNA-binding affinity was unaltered. Using various modified minireplicons, we found that the enhanced reporter gene expression could be accounted for by increased minigenome replication, whereas mRNA synthesis itself was not affected by Q202 mutation. Moreover, the enhanced activities were still observed in minigenomes partially lacking the leader sequence and which were not of hexamer genome length. Unexpectedly, recombinant hPIV2 possessing the NP Q202A mutation could not be recovered from cDNA.

Indexed as

Amino Acid SequenceBinding SitesCell LineGenome, ViralHumansNucleocapsidNucleoproteinsParainfluenza Virus 2, HumanPoint MutationRNA-Binding MotifsRNA-Dependent RNA PolymeraseRNA, ViralTranscription, GeneticViral ProteinsNucleoproteinsRNA-Dependent RNA PolymeraseRNA, ViralViral Proteinsencapsidationhuman parainfluenza virus type 2nucleoproteinpolymerase

Identifiers

PMID28179533
PMCPMC5391449
OpenAlexW2586162130

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.