Evidence map›Paper›PMID 28177478›Full record

ArticleGlycobiology2017

Rapid screening of sugar-nucleotide donor specificities of putative glycosyltransferases.

M Osman Sheikh, Stephanie M Halmo, Sneha Patel, Dustin Middleton, Hideyuki Takeuchi, Christopher M Schafer, Christopher M West, Robert S Haltiwanger, Fikri Y Avci, Kelley W Moremen and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Glycobiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 56 citations in OpenAlex.

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  14. A New Face of the Old Gene: Deletion of theInternational journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

M Osman SheikhComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Stephanie M HalmoComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Sneha PatelComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Dustin MiddletonComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Hideyuki TakeuchiComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Christopher M SchaferOklahoma Medical Research Foundation, Oklahoma City, OK, USA.
Christopher M WestDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, USA.
Robert S HaltiwangerComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Fikri Y AvciComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Kelley W MoremenComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Lance WellsComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Carbohydrate Competence Center · NLOklahoma Medical Research Foundation · USUniversity of Georgia · US

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY W. · 2012 to 2019
$14.5M
TR&D1: Stem Cell and Induced Pluripotent Stem Cell Resources (Pages 116-134)P41GM103490 · NIGMS · UNIVERSITY OF GEORGIA · PI PIERCE, J. MICHAEL · 2012 to 2018
$13.7M
O-Glycosylation of Epidermal Growth Factor-like MotifsR01GM061126 · NIGMS · UNIVERSITY OF GEORGIA · PI HALTIWANGER, ROBERT S. · 2001 to 2021
$9.1M
Recombinant Production of Glycosylation Enzymes for Biochem/Structural StudiesP01GM107012 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY · 2013 to 2017
$7.5M
Transfer of 5R01GM037539 - 22 CYTOSOLIC PROLINE HYDROXYLATION AND GLYCOSYLATIONR01GM037539 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI WEST, CHRISTOPHER M. · 1986 to 2016
$4.4M
Molecular Mechanisms for Carbohydrate Presentation to CD4+ T cells by MHCII PathwayR01AI123383 · NIAID · UNIVERSITY OF GEORGIA · PI Fikri Y Avci · 2016 to 2026
$4.2M
Structure and Function in alpha-Dystroglycan GlycosylationR01GM111939 · NIGMS · UNIVERSITY OF GEORGIA · PI Lance Wells · 2014 to 2026
$4.0M
Enabling tools for protists pathogen glycobiologyR21AI123161 · NIAID · UNIVERSITY OF GEORGIA · PI TARLETON, RICK L, WELLS, LANCE · 2015 to 2016
$745k
Synthetic neoglycopeptides as Chagas disease vaccineR21AI115451 · NIAID · UNIVERSITY OF TEXAS EL PASO · PI ALMEIDA, IGOR C · 2015 to 2016
$423k
NIAID NIH HHS R01 AI123383NIAID NIH HHS R21 AI115451NIAID NIH HHS R21 AI123161NIGMS NIH HHS P01 GM107012NIGMS NIH HHS P41 GM103390NIGMS NIH HHS P41 GM103490NIGMS NIH HHS R01 GM037539NIGMS NIH HHS R01 GM061126NIGMS NIH HHS R01 GM111939
6 · The paper itself

Abstract

Determining the correct enzymatic activity of putative glycosyltransferases (GTs) can be challenging as these enzymes can utilize multiple donor and acceptor substrates. Upon initial determination of the donor-sugar nucleotide(s), a GT utilizes various acceptor molecules that can then be tested. Here, we describe a quick method to screen sugar-nucleotide donor specificities of GTs utilizing a sensitive, nonradioactive, commercially available bioluminescent uridine diphosphate detection kit. This in vitro method allowed us to validate the sugar-nucleotide donor-substrate specificities of recombinantly expressed human, bovine, bacterial and protozoan GTs. Our approach, which is less time consuming than many traditional assays that utilize radiolabeled sugars and chromatographic separations, should facilitate discovery of novel GTs that participate in diverse biological processes.

Indexed as

AnimalsBacteriaCattleGlycosyltransferasesHumansNucleotidesSubstrate SpecificitySugarsGlycosyltransferasesNucleotidesSugarsassaysenzymologyglycosyltransferasemethodssugar-nucleotide

Identifiers

PMID28177478
PMCPMC5789813
OpenAlexW2550525543

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.