Evidence map›Paper›PMID 28176784›Full record

ArticleNature communications2017

Innovation and constraint leading to complex multicellularity in the Ascomycota.

Tu Anh Nguyen, Ousmane H Cissé, Jie Yun Wong, Peng Zheng, David Hewitt, Minou Nowrousian, Jason E Stajich, Gregory Jedd

Abstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Fungal taxonomy: A puzzle with many missing piecesBiomedica : revista del Instituto Nacional de Salud · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Evolution of fungal phenotypic disparity.Nature ecology & evolution · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Microorganisms · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Tu Anh NguyenTemasek Life Sciences Laboratory and Department of Biological Sciences, The National University of Singapore, Singapore 117604, Singapore.
Ousmane H CisséDepartment of Plant Pathology and Microbiology, Institute for Integrative Genome Biology, University of California-Riverside, Riverside, California 92521, USA.
Jie Yun WongTemasek Life Sciences Laboratory and Department of Biological Sciences, The National University of Singapore, Singapore 117604, Singapore.
Peng ZhengTemasek Life Sciences Laboratory and Department of Biological Sciences, The National University of Singapore, Singapore 117604, Singapore.
David HewittDepartment of Botany, Academy of Natural Sciences of Philadelphia, Philadelphia, Pennsylvania 19103, USA.
Minou NowrousianLehrstuhl für Allgemeine und Molekulare Botanik, Ruhr-Universität Bochum, 44780 Bochum, Germany.ORCID 0000-0003-0075-6695
Jason E StajichDepartment of Plant Pathology and Microbiology, Institute for Integrative Genome Biology, University of California-Riverside, Riverside, California 92521, USA.ORCID 0000-0002-7591-0020
Gregory JeddTemasek Life Sciences Laboratory and Department of Biological Sciences, The National University of Singapore, Singapore 117604, Singapore.

Funding

Tools for Functional Analysis and Cell BiologyP01GM068087 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C. · 2004 to 2013
$19.3M
NIGMS NIH HHS P01 GM068087
6 · The paper itself

Abstract

The advent of complex multicellularity (CM) was a pivotal event in the evolution of animals, plants and fungi. In the fungal Ascomycota, CM is based on hyphal filaments and arose in the Pezizomycotina. The genus Neolecta defines an enigma: phylogenetically placed in a related group containing mostly yeasts, Neolecta nevertheless possesses Pezizomycotina-like CM. Here we sequence the Neolecta irregularis genome and identify CM-associated functions by searching for genes conserved in Neolecta and the Pezizomycotina, which are absent or divergent in budding or fission yeasts. This group of 1,050 genes is enriched for functions related to diverse endomembrane systems and their organization. Remarkably, most show evidence for divergence in both yeasts. Using functional genomics, we identify new genes involved in fungal complexification. Together, these data show that rudimentary multicellularity is deeply rooted in the Ascomycota. Extensive parallel gene divergence during simplification and constraint leading to CM suggest a deterministic process where shared modes of cellular organization select for similarly configured organelle- and transport-related machineries.

Indexed as

AscomycotaBiodiversityBiological TransportComputational BiologyDNA, FungalEvolution, MolecularFungal ProteinsGenome, FungalPhylogenySequence AlignmentWhole Genome SequencingDNA, FungalFungal Proteins

Identifiers

PMID28176784
PMCPMC5309816

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.