Evidence map›Paper›PMID 28175398›Full record

ArticleNucleic acids research2017

Differential requirement of Srs2 helicase and Rad51 displacement activities in replication of hairpin-forming CAG/CTG repeats.

Jennifer H G Nguyen, David Viterbo, Ranjith P Anand, Lauren Verra, Laura Sloan, Guy-Franck Richard, Catherine H Freudenreich

Abstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Alternative DNA StructuresMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Genetic Assays to Study Repeat Fragility in Saccharomyces cerevisiae.Methods in molecular biology (Clifton, N.J.) · 2020
    Article
  10. Distinct roles foreLife · 2019
    Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jennifer H G NguyenDepartment of Biology, Tufts University, Medford, MA 02155, USA.
David ViterboInstitut Pasteur, Department Genomes & Genetics, CNRS, UMR3525, Université Pierre et Marie Curie, UFR927, 25 rue du Dr Roux, F-75015 Paris, France.
Ranjith P AnandDepartment of Biology, Tufts University, Medford, MA 02155, USA.
Lauren VerraDepartment of Biology, Tufts University, Medford, MA 02155, USA.
Laura SloanDepartment of Biology, Tufts University, Medford, MA 02155, USA.
Guy-Franck RichardInstitut Pasteur, Department Genomes & Genetics, CNRS, UMR3525, Université Pierre et Marie Curie, UFR927, 25 rue du Dr Roux, F-75015 Paris, France.
Catherine H FreudenreichDepartment of Biology, Tufts University, Medford, MA 02155, USA.

Funding

Mutations Arising During DNA RepairP01GM105473 · NIGMS · BRANDEIS UNIVERSITY · PI LOVETT, SUSAN THOMAS · 2014 to 2018
$8.6M
NIGMS NIH HHS P01 GM105473
6 · The paper itself

Abstract

Trinucleotide repeats are a source of genome instability, causing replication fork stalling, chromosome fragility, and impaired repair. Specialized helicases play an important role in unwinding DNA structures to maintain genome stability. The Srs2 helicase unwinds DNA hairpins, facilitates replication, and prevents repeat instability and fragility. However, since Srs2 is a multifunctional protein with helicase activity and the ability to displace Rad51 recombinase, it was unclear which functions were required for its various protective roles. Here, using SRS2 separation-of-function alleles, we show that in the absence of Srs2 recruitment to PCNA or in helicase-deficient mutants, breakage at a CAG/CTG repeat increases. We conclude that Srs2 interaction with PCNA allows the helicase activity to unwind fork-blocking CAG/CTG hairpin structures to prevent breaks. Independently of PCNA binding, Srs2 also displaces Rad51 from nascent strands to prevent recombination-dependent repeat expansions and contractions. By 2D gel electrophoresis, we detect two different kinds of structured intermediates or joint molecules (JMs). Some JMs are Rad51-independent and exhibit properties of reversed forks, including being processed by the Exo1 nuclease. In addition, in a helicase-deficient mutant, Rad51-dependent JMs are detected, probably corresponding to recombination between sisters. These results clarify the many roles of Srs2 in facilitating replication through fork-blocking hairpin lesions.

Indexed as

DNA ReplicationGenome, FungalAllelesChromosome FragilityDNA, FungalDNA HelicasesElectrophoresis, Gel, Two-DimensionalExodeoxyribonucleasesGenomic InstabilityInverted Repeat SequencesProliferating Cell Nuclear AntigenProtein BindingRad51 RecombinaseSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTrinucleotide RepeatsDNA, FungalDNA Helicasesexodeoxyribonuclease IExodeoxyribonucleasesProliferating Cell Nuclear AntigenRAD51 protein, S cerevisiaeRad51 RecombinaseSaccharomyces cerevisiae ProteinsSRS2 protein, S cerevisiae

Identifiers

PMID28175398
PMCPMC5416882

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.