Evidence map›Paper›PMID 28174720›Full record

ArticleCellular and molecular gastroenterology and hepatology2016

Netrin-1 Protects Hepatocytes Against Cell Death Through Sustained Translation During the Unfolded Protein Response.

Thomas Lahlali, Marie-Laure Plissonnier, Cristina Romero-López, Maud Michelet, Benjamin Ducarouge, Alfredo Berzal-Herranz, Fabien Zoulim, Patrick Mehlen, Romain Parent

Open access · goldAbstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Article
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  7. Article
  8. Article
  9. Mutations in the netrin-1 gene cause congenital mirror movements.The Journal of clinical investigation · 2017
    Article
  10. Netrin-1: Needed Help for Throughput in the ER in Patients With Liver Disease.Cellular and molecular gastroenterology and hepatology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Thomas LahlaliInserm U1052-UMR CNRS 5286, Centre Léon Berard, Centre de Recherche en Cancérologie, Lyon, France.
Marie-Laure PlissonnierInserm U1052-UMR CNRS 5286, Centre Léon Berard, Centre de Recherche en Cancérologie, Lyon, France.
Cristina Romero-LópezInstituto de Parasitología y Biomedicina López-Neyra Consejo Superior de Investigaciones Científicas, Ciencia e Investigación (IPBLN-CSIC), Parque Tecnológico Ciencias de la Salud Granada, Armilla, Granada, Spain.
Maud MicheletInserm U1052-UMR CNRS 5286, Centre Léon Berard, Centre de Recherche en Cancérologie, Lyon, France.
Benjamin DucarougeInserm U1052-UMR Centre National de la Recherche Scientifique 5286, Centre Léon Berard, Centre de Recherche en Cancérologie, Lyon, France.
Alfredo Berzal-HerranzInstituto de Parasitología y Biomedicina López-Neyra Consejo Superior de Investigaciones Científicas, Ciencia e Investigación (IPBLN-CSIC), Parque Tecnológico Ciencias de la Salud Granada, Armilla, Granada, Spain.
Fabien ZoulimInserm U1052-UMR CNRS 5286, Centre Léon Berard, Centre de Recherche en Cancérologie, Lyon, France.
Patrick MehlenInserm U1052-UMR Centre National de la Recherche Scientifique 5286, Centre Léon Berard, Centre de Recherche en Cancérologie, Lyon, France.
Romain ParentInserm U1052-UMR CNRS 5286, Centre Léon Berard, Centre de Recherche en Cancérologie, Lyon, France.
Centre Léon Bérard · FRConsejo Superior de Investigaciones Científicas · ESInserm · FRCentre de Recherche en Cancérologie de Lyon · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND &

aimsNetrin-1, a multifunctional secreted protein, is up-regulated in cancer and inflammation. Netrin-1 blocks apoptosis induced by the prototypical dependence receptors deleted in colorectal carcinoma and uncoordinated phenotype-5. Although the unfolded protein response (UPR) triggers apoptosis on exposure to stress, it first attempts to restore endoplasmic reticulum homeostasis to foster cell survival. Importantly, UPR is implicated in chronic liver conditions including hepatic oncogenesis. Netrin-1's implication in cell survival on UPR in this context is unknown.

methodsIsolation of translational complexes, determination of RNA secondary structures by selective 2'-hydroxyl acylation and primer extension/dimethyl sulfate, bicistronic constructs, as well as conventional cell biology and biochemistry approaches were used on in vitro-grown hepatocytic cells, wild-type, and netrin-1 transgenic mice.

resultsHepaRG cells constitute a bona fide model for UPR studies in vitro through adequate activation of the 3 sensors of the UPR (protein kinase RNA-like endoplasmic reticulum kinase (PERK)), inositol requiring enzyme 1α (IRE1α), and activated transcription factor 6 (ATF6). The netrin-1 messenger RNA 5'-end was shown to fold into a complex double pseudoknot and bear E-loop motifs, both of which are representative hallmarks of related internal ribosome entry site regions. Cap-independent translation of netrin 5' untranslated region-driven luciferase was observed on UPR in vitro. Unlike several structurally related oncogenic transcripts (l-myc, c-myc, c-myb), netrin-1 messenger RNA was selected for translation during UPR both in human hepatocytes and in mice livers. Depletion of netrin-1 during UPR induces apoptosis, leading to cell death through an uncoordinated phenotype-5A/C-mediated involvement of protein phosphatase 2A and death-associated protein kinase 1 in vitro and in netrin transgenic mice.

conclusionsUPR-resistant, internal ribosome entry site-driven netrin-1 translation leads to the inhibition of uncoordinated phenotype-5/death-associated protein kinase 1-mediated apoptosis in the hepatic context during UPR, a hallmark of chronic liver disease.

Indexed as

ATF6, activated transcription factor 6CMV, cytomegalovirusDAPK, death-associated protein kinaseDMS, dimethyl sulfateDR, dependence receptorDTT, dithiothreitoleIF2α, Eukaryotic translation initiation factor 2AER, endoplasmic reticulumFLuc, Firefly luciferaseHBV, hepatitis B virusHCC, hepatocellular carcinomaHCV, hepatitis C virusHepatocyteIRE1α, inositol requiring enzyme 1αIRES, internal ribosome entry siteLSL, (Lox-Stop-Lox)mRNA, messenger RNANetrinNMIA, N-methyl-isatoic anhydridepBic, Bicistronic plasmidPBS, phosphate-buffered salinePERK, protein kinase RNA (PKR)-like endoplasmic reticulum kinasePP2A, protein phosphatase 2APR65β, erine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoformqRT-PCR, quantitative reverse-transcription polymerase chain reactionRLuc, Renilla lucerifasesiRNA, small interfering RNATranslationTUNEL, terminal deoxynucleotidyl transferase–mediated deoxyuridine triphosphate nick-end labelingTu, tunicamycinUNC5, uncoordinated phenotype-5UPRUPR, unfolded protein responseUTR, untranslated regionVR1, vanilloid receptor 1

Identifiers

PMID28174720
PMCPMC5042567
OpenAlexW2264831250

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.