ArticleMicrobiologyOpen2017
Illumina sequencing-based analysis of sediment bacteria community in different trophic status freshwater lakes.
Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
18 citing papers in PubMed.
- Divergent microbial functional pathways and declining redundancy in lake sediments across eutrophication gradients.Nature communications · 2026Article
- Mechanisms of 915 MHz Microwave Thermal Treatment on Physicochemical Properties and Microbial Communities in Sugarcane Continuous Cropping Soil.Microorganisms · 2026Article
- Structure and community assembly of rare bacterial community in sediments of Sancha Lake.Scientific reports · 2025Article
- Sediment bacterial biogeography across reservoirs in the Hanjiang river basin, southern China: the predominant influence of eutrophication-induced carbon enrichment.Frontiers in microbiology · 2025Article
- Characterizing nitrogen cycling microorganisms and genes in sediments of the Three Gorges Reservoir.PloS one · 2025Article
- The Impact of Warming on Assembly Processes and Diversity Patterns of Bacterial Communities in Mesocosms.Microorganisms · 2023Article
- Review
- Study on the community structure and function of symbiotic bacteria from different growth and developmental stages of Hypsizygus marmoreus.BMC microbiology · 2020Article
- Biomass addition alters community assembly in ultrafiltration membrane biofilms.Scientific reports · 2020Article
- A Review and Perspective of eDNA Application to Eutrophication and HAB Control in Freshwater and Marine Ecosystems.Microorganisms · 2020Review
- Changes in the Substrate Source Reveal Novel Interactions in the Sediment-Derived Methanogenic Microbial Community.International journal of molecular sciences · 2019Article
- Structural and functional microbial diversity along a eutrophication gradient of interconnected lakes undergoing anthropopressure.Scientific reports · 2019Article
- Spatial and Seasonal Variations in the Abundance of Nitrogen-Transforming Genes and the Microbial Community Structure in Freshwater Lakes with Different Trophic Statuses.International journal of environmental research and public health · 2019Article
- Microbial Community Structure in the Sediments and Its Relation to Environmental Factors in Eutrophicated Sancha Lake.International journal of environmental research and public health · 2019Article
- Vertical variation of bulk and metabolically active prokaryotic community in sediment of a hypereutrophic freshwater lake.Environmental science and pollution research international · 2019Article
- Trophic Status Is Associated With Community Structure and Metabolic Potential of Planktonic Microbiota in Plateau Lakes.Frontiers in microbiology · 2019Article
- Variation of Bacterial and Archaeal Community Structures in a Full-Scale Constructed Wetlands for Wastewater Treatment.Archaea (Vancouver, B.C.) · 2018Article
- Illumina sequencing-based analysis of sediment bacteria community in different trophic status freshwater lakes.MicrobiologyOpen · 2017Article
Corrections and comments
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Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Sediment bacterial community is the main driving force for nutrient cycling and energy transfer in aquatic ecosystem. A thorough understanding of the community's spatiotemporal variation is critical for us to understand the mechanisms of cycling and transfer. Here, we investigated the sediment bacterial community structures and their relations with environmental factors, using Lake Taihu as a model system to explore the dependence of biodiversity upon trophic level and seasonality. To combat the limitations of conventional techniques, we employed Illumina MiSeq Sequencing and LeFSe cladogram to obtain a more comprehensive view of the bacterial taxonomy and their variations of spatiotemporal distribution. The results uncovered a 1,000-fold increase in the total amount of sequences harvested and a reverse relationship between trophic level and the bacterial diversity in most seasons of a year. A total of 65 phyla, 221 classes, 436 orders, 624 families, and 864 genera were identified in the study area. Delta-proteobacteria and gamma-proteobacteria prevailed in spring/summer and winter, respectively, regardless trophic conditions; meanwhile, the two classes dominated in the eutrophication and mesotrophication lake regions, respectively, but exclusively in the Fall. For LEfSe analysis, bacterial taxon that showed the strongest seasonal or spatial variation, majority had the highest abundance in spring/summer or medium eutrophication region, respectively. Pearson's correlation analysis indicated that 5 major phyla and 18 sub-phylogenetic groups showed significant correlation with trophic status. Canonical correspondence analysis further revealed that porewater NH
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