Evidence map›Paper›PMID 28172980›Full record

ArticleHuman molecular genetics2016

Prenylated retinal ciliopathy protein RPGR interacts with PDE6δ and regulates ciliary localization of Joubert syndrome-associated protein INPP5E.

Kollu N Rao, Wei Zhang, Linjing Li, Manisha Anand, Hemant Khanna

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Post-Translational Modifications in Cilia and Ciliopathies.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  5. Article
  6. Regulation of INPP5E in Ciliogenesis, Development, and Disease.International journal of biological sciences · 2025
    Review
  7. Review
  8. Identification of a novelFrontiers in pediatrics · 2024
    Article
  9. Review
  10. Impaired glutamylation of RPGRProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Compartmentalization of Photoreceptor Sensory Cilia.Frontiers in cell and developmental biology · 2021
    Review
  16. Translational Read-Through Therapy ofInternational journal of molecular sciences · 2020
    Article
  17. Review
  18. Article
  19. Review
  20. Disruption of RPGR protein interaction network is the common feature of RPGR missense variations that cause XLRP.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kollu N RaoDepartment of Ophthalmology, Horae Gene Therapy Center, UMASS Medical School, Worcester, MA, USA.
Wei ZhangDepartment of Ophthalmology, Horae Gene Therapy Center, UMASS Medical School, Worcester, MA, USA.
Linjing LiDepartment of Ophthalmology, Horae Gene Therapy Center, UMASS Medical School, Worcester, MA, USA.
Manisha AnandDepartment of Ophthalmology, Horae Gene Therapy Center, UMASS Medical School, Worcester, MA, USA.
Hemant KhannaDepartment of Ophthalmology, Horae Gene Therapy Center, UMASS Medical School, Worcester, MA, USA.

Funding

Function of Ciliary Disease Protein Retinitis Pigmentosa GTPase Regulator (RPGR)R01EY022372 · NEI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PAZOUR, GREGORY J · 2012 to 2020
$3.7M
Transmission Electron Microscope for Core EM FacilityS10RR027897 · NCRR · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CRAIG, ROGER W · 2009 to 2009
$500k
NCRR NIH HHS S10 RR027897NEI NIH HHS EY022372NEI NIH HHS R01 EY022372
6 · The paper itself

Abstract

Ciliary trafficking defects underlie the pathogenesis of severe human ciliopathies, including Joubert Syndrome (JBTS), Bardet-Biedl Syndrome, and some forms of retinitis pigmentosa (RP). Mutations in the ciliary protein RPGR (retinitis pigmentosa GTPase regulator) are common causes of RP-associated photoreceptor degeneration worldwide. While previous work has suggested that the localization of RPGR to cilia is critical to its functions, the mechanism by which RPGR and its associated cargo are trafficked to the cilia is unclear. Using proteomic and biochemical approaches, we show that RPGR interacts with two JBTS-associated ciliary proteins: PDE6δ (delta subunit of phosphodiesterase; a prenyl-binding protein) and INPP5E (inositol polyphosphate-5-phosphatase 5E). We find that PDE6δ binds selectively to the C-terminus of RPGR and that this interaction is critical for RPGR’s localization to cilia. Furthermore, we show that INPP5E associates with the N-terminus of RPGR and trafficking of INPP5E to cilia is dependent upon the ciliary localization of RPGR. These results implicate prenylation of RPGR as a critical modification for its localization to cilia and, in turn suggest that trafficking of INPP5E to cilia depends upon the interaction of RPGR with PDE6δ. Finally, our results implicate INPP5E, a novel RPGR-interacting protein, in the pathogenesis of RPGR-associated ciliopathies.

Indexed as

Abnormalities, MultipleAnimalsCarrier ProteinsCell LineCerebellumCiliaCyclic Nucleotide Phosphodiesterases, Type 6Eye AbnormalitiesEye ProteinsHumansKidney Diseases, CysticMaleMicePhosphoinositide 5-PhosphatasesPhosphoric Monoester HydrolasesProtein Interaction Domains and MotifsCarrier ProteinsCyclic Nucleotide Phosphodiesterases, Type 6Eye ProteinsPDE6D protein, humanPhosphoinositide 5-PhosphatasesPhosphoric Monoester HydrolasesRPGR protein, humanRPGR protein, mouse

Identifiers

PMID28172980
PMCPMC6078598
OpenAlexW2513236653

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.