Evidence map›Paper›PMID 28171547›Full record

ArticleHuman molecular genetics2016

Cystic fibrosis gene modifier SLC26A9 modulates airway response to CFTR-directed therapeutics.

Lisa J Strug, Tanja Gonska, Gengming He, Katherine Keenan, Wan Ip, Pierre-Yves Boëlle, Fan Lin, Naim Panjwani, Jiafen Gong, Weili Li and 12 more

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 2 pooled it
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 2 syntheses or guidelines pooled it, 90 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Nucleotide Variant in theJournal of clinical medicine · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. SLC26 Anion Transporters.Handbook of experimental pharmacology · 2024
    Review
  10. Review
  11. Review
  12. Modifier Factors of Cystic Fibrosis Phenotypes: A Focus on Modifier Genes.International journal of molecular sciences · 2022
    Review
  13. Article
  14. Expression of SLC26A9 in Airways and Its Potential Role in Asthma.International journal of molecular sciences · 2022
    Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Synergy in Cystic Fibrosis Therapies: Targeting SLC26A9.International journal of molecular sciences · 2021
    Article
  20. Separating the contributions of SLC26A9 and CFTR to anion secretion in primary human bronchial epithelia.American journal of physiology. Lung cellular and molecular physiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 9 institutions in 2 countries.

Lisa J StrugProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
Tanja GonskaDepartment of Pediatrics, University of Toronto, Toronto, Ontario, Canada
Gengming HeProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
Katherine KeenanProgram in Physiology and Experimental Medicine, The Hospital for Sick Children, Toronto, Ontario, Canada.
Wan IpProgram in Physiology and Experimental Medicine, The Hospital for Sick Children, Toronto, Ontario, Canada.
Pierre-Yves BoëlleSorbonne Universités, Université Pierre et Marie Curie (UPMC) Paris 06, Paris, France
Fan LinProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
Naim PanjwaniProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
Jiafen GongProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
Weili LiProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
David SoaveProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
Bowei XiaoProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
Elizabeth TullisDepartment of Respiratory Medicine and Li Ka Shing Knowledge Institute, St. Michael's Hospital, University of Toronto, Toronto, Ontario, Canada.
Harvey RabinDepartment of Medicine, University of Calgary, Calgary, Alberta, Canada
Michael D ParkinsDepartment of Medicine, University of Calgary, Calgary, Alberta, Canada
April PriceDivision of Paediatric Respirology, Department of Paediatrics, Children's Hospital at London Health Sciences Centre, London, Ontario, Canada.
Peter C ZuberbuhlerDepartment of Pediatrics, University of Alberta, Edmonton, Alberta, Canada.
Harriet CorvolSorbonne Universités, Université Pierre et Marie Curie (UPMC) Paris 06, Paris, France
Felix RatjenProgram in Physiology and Experimental Medicine, The Hospital for Sick Children, Toronto, Ontario, Canada.
Lei SunDivision of Biostatistics, Dalla Lana School of Public Health, University of Toronto, Ontario, Canada
Christine E BearProgram in Molecular Structure and Function, The Hospital for Sick Children, Toronto, Ontario, Canada, Departments of Biochemestry and Physiology
Johanna M RommensProgram in Genetics and Genome Biology, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada.
SickKids Foundation · CAHospital for Sick Children · CAHôpital Saint-Antoine · FRUniversity of Calgary · CAUniversity of Toronto · CACanada Research Chairs · CALondon Health Sciences Centre · CAPublic Health Ontario · CAUniversity of Alberta · CA

Funding

CIHR MOP-258916CIHR MOP-310732
6 · The paper itself

Abstract

Cystic fibrosis is realizing the promise of personalized medicine. Recent advances in drug development that target the causal CFTR directly result in lung function improvement, but variability in response is demanding better prediction of outcomes to improve management decisions. The genetic modifier SLC26A9 contributes to disease severity in the CF pancreas and intestine at birth and here we assess its relationship with disease severity and therapeutic response in the airways. SLC26A9 association with lung disease was assessed in individuals from the Canadian and French CF Gene Modifier consortia with CFTR-gating mutations and in those homozygous for the common Phe508del mutation. Variability in response to a CFTR-directed therapy attributed to SLC26A9 genotype was assessed in Canadian patients with gating mutations. A primary airway model system determined if SLC26A9 shows modification of Phe508del CFTR function upon treatment with a CFTR corrector. In those with gating mutations that retain cell surface-localized CFTR we show that SLC26A9 modifies lung function while this is not the case in individuals homozygous for Phe508del where cell surface expression is lacking. Treatment response to ivacaftor, which aims to improve CFTR-channel opening probability in patients with gating mutations, shows substantial variability in response, 28% of which can be explained by rs7512462 in SLC26A9 (P = 0.0006). When homozygous Phe508del primary bronchial cells are treated to restore surface CFTR, SLC26A9 likewise modifies treatment response (P = 0.02). Our findings indicate that SLC26A9 airway modification requires CFTR at the cell surface, and that a common variant in SLC26A9 may predict response to CFTR-directed therapeutics.

Indexed as

Genes, ModifierPharmacogenomic VariantsAminophenolsAntiportersCanadaCells, CulturedChloride Channel AgonistsCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorFemaleFranceGenetic Association StudiesHumansLungMaleModels, GeneticAminophenolsAntiportersCFTR protein, humanChloride Channel AgonistsCystic Fibrosis Transmembrane Conductance RegulatorivacaftorQuinolonesSLC26A9 protein, humanSulfate Transporters

Identifiers

PMID28171547
PMCPMC5886039
OpenAlexW2514448765

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.