Evidence map›Paper›PMID 28170428›Full record

ArticlePloS one2017

Comparative study on the in vitro effects of Pseudomonas aeruginosa and seaweed alginates on human gut microbiota.

Shaofeng Bai, Huahai Chen, Liying Zhu, Wei Liu, Hongwei D Yu, Xin Wang, Yeshi Yin

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Article
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  4. Article
  5. PeerJ · 2025
    Article
  6. Article
  7. Review
  8. International journal of molecular sciences · 2023
    Review
  9. Article
  10. Digestive Characteristics ofFrontiers in nutrition · 2022
    Article
  11. 2'-Fucosyllactose Increases the Abundance ofFrontiers in microbiology · 2022
    Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Shaofeng BaiState Key Laboratory of Breeding Base for Zhejiang Sustainable Pest, and Key laboratory for Food Microbial Technology of Zhejiang Province, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, P. R. China.
Huahai ChenState Key Laboratory of Breeding Base for Zhejiang Sustainable Pest, and Key laboratory for Food Microbial Technology of Zhejiang Province, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, P. R. China.
Liying ZhuState Key Laboratory of Breeding Base for Zhejiang Sustainable Pest, and Key laboratory for Food Microbial Technology of Zhejiang Province, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, P. R. China.
Wei LiuState Key Laboratory of Breeding Base for Zhejiang Sustainable Pest, and Key laboratory for Food Microbial Technology of Zhejiang Province, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, P. R. China.
Hongwei D YuDepartments of Biomedical Sciences, Pediatrics, Joan C. Edwards School of Medicine at Marshall University, Huntington, West Virginia, United States of America.
Xin WangState Key Laboratory of Breeding Base for Zhejiang Sustainable Pest, and Key laboratory for Food Microbial Technology of Zhejiang Province, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, P. R. China.
Yeshi YinState Key Laboratory of Breeding Base for Zhejiang Sustainable Pest, and Key laboratory for Food Microbial Technology of Zhejiang Province, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, P. R. China.
ZheJiang Academy of Agricultural Sciences · CNInstitute of Plant Protection · CNMarshall University · USZhejiang Normal University · CN

Funding

WV INBRE: The Inhibitor of Growth Family Member 4 (ING4) inhibits L-Type Amino Acid Transporter 1 (LAT1) expression to suppress Breast CancerP20GM103434 · NIGMS · MARSHALL UNIVERSITY · PI GARY O RANKIN · 2012 to 2026
$61.1M
Kentucky Center for Clinical and Translational ScienceUL1TR000117 · NCATS · UNIVERSITY OF KENTUCKY · PI KERN, PHILIP A · 2012 to 2015
$13.3M
Bioengineering a non-pathogenic bacteria to produce medically-relevant biopolymersR43GM113545 · NIGMS · PROGENESIS TECHNOLOGIES, LLC · PI NILES, RICHARD M. · 2015 to 2015
$144k
NCATS NIH HHS UL1 TR000117NIGMS NIH HHS P20 GM103434NIGMS NIH HHS R43 GM113545
6 · The paper itself

Abstract

Alginates pertain to organic polysaccharides that have been extensively used in food- and medicine-related industries. The present study obtained alginates from an alginate overproducing Pseudomonas aeruginosa PAO1 mutant by screening transposon mutagenesis libraries. The interaction between bacterial and seaweed alginates and gut microbiota were further studied by using an in vitro batch fermentation system. Thin-layer chromatography (TLC) analysis indicated that both bacterial and seaweed alginates can be completely degraded by fecal bacteria isolated from study volunteers, indicating that a minor structural difference between bacterial and seaweed alginates (O-acetylation and lack of G-G blocks) didn't affect the digestion of alginates by human microbiota. Although, the digestion of bacterial and seaweed alginates was attributed to different Bacteroides xylanisolvens strains, they harbored similar alginate lyase genes. Genus Bacteroides with alginate-degrading capability were enriched in growth medium containing bacterial or seaweed alginates after in vitro fermentation. Short-chain fatty acid (SCFA) production in both bacterial and seaweed alginates was also comparable, but was significantly higher than the same medium using starch. In summary, the present study has isolated an alginate-overproducing P. aeruginosa mutant strain. Both seaweed and bacterial alginates were degraded by human gut microbiota, and their regulatory function on gut microbiota was similar.

Indexed as

AlginatesBatch Cell Culture TechniquesDNA Transposable ElementsFatty AcidsFecesFermentationGastrointestinal MicrobiomeHumansIn Vitro TechniquesMetagenomeMetagenomicsMutationPseudomonas aeruginosaRNA, Ribosomal, 16SSeaweedAlginatesDNA Transposable ElementsFatty AcidsRNA, Ribosomal, 16S

Identifiers

PMID28170428
PMCPMC5295698
OpenAlexW2586393688

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.