Evidence map›Paper›PMID 28169492›Full record

ArticleMicrobial biotechnology2017

Comparison of biofilm formation and motility processes in arsenic-resistant Thiomonas spp. strains revealed divergent response to arsenite.

Julien Farasin, Sandrine Koechler, Hugo Varet, Julien Deschamps, Marie-Agnès Dillies, Caroline Proux, Mathieu Erhardt, Aline Huber, Bernd Jagla, Romain Briandet and 2 more

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Mixotrophic Iron-OxidizingApplied and environmental microbiology · 2020
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Julien FarasinLaboratoire Génétique moléculaire, Génomique et Microbiologie, UMR7156, CNRS and Université de Strasbourg, Institut de Botanique, Strasbourg, France.
Sandrine KoechlerLaboratoire Génétique moléculaire, Génomique et Microbiologie, UMR7156, CNRS and Université de Strasbourg, Institut de Botanique, Strasbourg, France.
Hugo VaretInstitut Pasteur, Plate-forme Transcriptome et Epigenome, BioMics, Centre d'innovation et recherche technologique, Paris, France.
Julien DeschampsMicalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France.
Marie-Agnès DilliesInstitut Pasteur, Plate-forme Transcriptome et Epigenome, BioMics, Centre d'innovation et recherche technologique, Paris, France.
Caroline ProuxInstitut Pasteur, Plate-forme Transcriptome et Epigenome, BioMics, Centre d'innovation et recherche technologique, Paris, France.
Mathieu ErhardtUniversité de Strasbourg, CNRS, IBMP UPR 2357, F-67000 Strasbourg, France.
Aline HuberLaboratoire Génétique moléculaire, Génomique et Microbiologie, UMR7156, CNRS and Université de Strasbourg, Institut de Botanique, Strasbourg, France.
Bernd JaglaInstitut Pasteur, Plate-forme Transcriptome et Epigenome, BioMics, Centre d'innovation et recherche technologique, Paris, France.
Romain BriandetMicalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France.
Jean-Yves CoppéeInstitut Pasteur, Plate-forme Transcriptome et Epigenome, BioMics, Centre d'innovation et recherche technologique, Paris, France.
Florence Arsène-PloetzeLaboratoire Génétique moléculaire, Génomique et Microbiologie, UMR7156, CNRS and Université de Strasbourg, Institut de Botanique, Strasbourg, France.
Institut Pasteur · FRCentre National de la Recherche Scientifique · FRUniversité de Strasbourg · FRMicrobiologie de l’alimentation au service de la santé · FRUniversité Paris-Saclay · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria of the genus Thiomonas are found ubiquitously in arsenic contaminated waters such as acid mine drainage (AMD), where they contribute to the precipitation and the natural bioremediation of arsenic. In these environments, these bacteria have developed a large range of resistance strategies among which the capacity to form particular biofilm structures. The biofilm formation is one of the most ubiquitous adaptive response observed in prokaryotes to various stresses, such as those induced in the presence of toxic compounds. This study focused on the process of biofilm formation in three Thiomonas strains (CB1, CB2 and CB3) isolated from the same AMD. The results obtained here show that these bacteria are all capable of forming biofilms, but the architecture and the kinetics of formation of these biofilms differ depending on whether arsenite is present in the environment and from one strain to another. Indeed, two strains favoured biofilm formation, whereas one favoured motility in the presence of arsenite. To identify the underlying mechanisms, the patterns of expression of some genes possibly involved in the process of biofilm formation were investigated in Thiomonas sp. CB2 in the presence and absence of arsenite, using a transcriptomic approach (RNA-seq). The findings obtained here shed interesting light on how the formation of biofilms, and the motility processes contribute to the adaptation of Thiomonas strains to extreme environments.

Indexed as

ArsenitesBiofilmsBurkholderialesDrug Resistance, BacterialEnvironmental PollutantsGene Expression ProfilingLocomotionarseniteArsenitesEnvironmental Pollutants

Identifiers

PMID28169492
PMCPMC5481541
OpenAlexW2586921544

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.