Evidence map›Paper›PMID 28168328›Full record

ArticleJournal of molecular evolution2017

Patterns of Evolutionary Trajectories and Domestication History within the Genus Hordeum Assessed by REMAP Markers.

Georgi Bonchev, Roman Dusinský, Pavol Hauptvogel, Miroslav Švec

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In one paragraph

Article in Journal of molecular evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Georgi BonchevLaboratory of Genome Dynamics and Stability, Institute of Plant Physiology and Genetics, Acad. G. Bonchev Str, Build. 21, 1113, Sofia, Bulgaria. bonchevg@mail.bg.
Roman DusinskýDepartment of Genetics, Faculty of Natural Sciences, Comenius University, Mlynská dolina B1, 842 15, Bratislava 4, Slovakia.
Pavol HauptvogelPlant Production Research Center, Bratislavská cesta 122, 921 68, Piešťany, Slovakia.
Miroslav ŠvecDepartment of Genetics, Faculty of Natural Sciences, Comenius University, Mlynská dolina B1, 842 15, Bratislava 4, Slovakia.
Comenius University Bratislava · SKInstitute of Plant Physiology and Genetics · BGPlant Production Research Institute · SK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The patterns of genetic diversity related to the taxonomy and domestication history of 85 accessions representing the main four species of the genus Hordeum were examined by retrotransposon-microsatellite amplified polymorphism (REMAP) markers based on the retrotransposon BARE-1. A substantial level of genetic polymorphisms at among- and within-species level was observed showing that this retrotransposon family and its adjacent genomic regions has been a target for genome dynamics during the evolution and domestication of barley. The obtained data are consistent with the current taxonomic status within the genus Hordeum. Similar level of genetic diversity was observed between the wild and the domesticated barley accessions suggesting that transposable elements` activity and accumulation may counteract the decrease of genome-wide diversity following domestication. In addition, eco-geographical sub-genome pools of the cultivated barley were identified in support to the theory of multiple origins of domestication within the genus Hordeum. We also provide conclusions about the relationship between accessions of different species and the putative routes of barley domestication. In conclusion, the retrotransposon BARE-1 stands as a reliable and perspective DNA marker for the assessment of the phylogenetic and domestication history in the genus Hordeum and other crop species.

Indexed as

Biological EvolutionDNA, PlantEvolution, MolecularGenetic MarkersGenetic VariationGenome, PlantHordeumPhylogenyPlant ProteinsPolymorphism, GeneticRetroelementsSequence Analysis, DNABARE-1 protein, Hordeum vulgareDNA, PlantGenetic MarkersPlant ProteinsRetroelementsBARE-1BarleyDomesticationGenetic diversityPopulation structure

Identifiers

PMID28168328
OpenAlexW2586153993

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.