Evidence map›Paper›PMID 28167801›Full record

ArticleThe Journal of experimental biology2017

Caspase-3 and GFAP as early markers for apoptosis and astrogliosis in shRNA-induced hippocampal cytotoxicity.

Anne Günther, Vince Luczak, Ted Abel, Arnd Baumann

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Anne GüntherInstitute of Complex Systems, Cellular Biophysics (ICS-4), Forschungszentrum Jülich, Jülich 52425, Germany.
Vince LuczakDepartment of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Ted AbelDepartment of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Arnd BaumannInstitute of Complex Systems, Cellular Biophysics (ICS-4), Forschungszentrum Jülich, Jülich 52425, Germany a.baumann@fz-juelich.de.ORCID 0000-0001-9456-7275
Forschungszentrum Jülich · DEUniversity of Pennsylvania · US

Funding

Epigenetic Mechanisms of Memory StorageR01MH087463 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI ABEL, EDWIN TED G. · 2010 to 2025
$7.8M
Role of Neuron-Specific Nucleosome Remodeling in Intellectual DisabilityR01MH101491 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI LYNCH, GARY S, WOOD, MARCELO ANDRES · 2013 to 2017
$2.3M
Non-neuronal regulators of sleepR01MH099544 · NIMH · WASHINGTON STATE UNIVERSITY · PI ABEL, EDWIN TED G., FRANK, MARCOS G · 2013 to 2017
$2.0M
Coordinate gene expression via nucleosome remodeling and chromosomal loopingR01DA036984 · NIDA · UNIVERSITY OF CALIFORNIA-IRVINE · PI AKBARIAN, SCHAHRAM, WOOD, MARCELO ANDRES · 2013 to 2016
$1.5M
NIDA NIH HHS R01 DA036984NIMH NIH HHS R01 MH087463NIMH NIH HHS R01 MH099544NIMH NIH HHS R01 MH101491
6 · The paper itself

Abstract

Genetic manipulation of cells and tissue by RNA interference has significantly contributed to the functional characterization of individual proteins and their role in physiological processes. Despite its versatility, RNA interference can have detrimental side effects, including reduced cell viability. We applied recombinant adeno-associated viruses by stereotaxic injection into the murine hippocampus to express different short hairpin RNA (shRNA) constructs along with eGFP. Tissue responses were assessed immunohistochemically for up to 8 weeks post-infection. Strong hippocampal degeneration and tissue atrophy was observed, most likely induced by high shRNA expression. The effect was entirely absent in mice injected with vectors driving only expression of eGFP. Active caspase-3 (Casp-3) and glial fibrillary acidic protein (GFAP) were identified as molecular markers and early indicators of adverse tissue responses. Our findings also demonstrate that detrimental effects of high shRNA expression in hippocampal tissue can be monitored even before the onset of tissue degeneration.

Indexed as

ApoptosisAnimalsCaspase 3Cells, CulturedDependovirusGene ExpressionGlial Fibrillary Acidic ProteinGreen Fluorescent ProteinsHippocampusHumansMaleMiceMice, Inbred C57BLNeuronsRNA InterferenceRNA, Small InterferingCaspase 3enhanced green fluorescent proteinGlial Fibrillary Acidic ProteinGreen Fluorescent ProteinsRNA, Small InterferingAdeno-associated virusHippocampusNeurotoxicityRNAiTissue atrophy

Identifiers

PMID28167801
PMCPMC5413069
OpenAlexW2586992365

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.