Evidence map›Paper›PMID 28167679›Full record

ArticleJournal of cell science2017

Independent mechanisms recruit the cohesin loader protein NIPBL to sites of DNA damage.

Christopher Bot, Annika Pfeiffer, Fosco Giordano, Dharani E Manjeera, Nico P Dantuma, Lena Ström

Abstract read
In one paragraph

Article in Journal of cell science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Review
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  11. Genome control by SMC complexes.Nature reviews. Molecular cell biology · 2023
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  19. Aire regulates chromatin looping by evicting CTCF from domain boundaries and favoring accumulation of cohesin on superenhancers.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Christopher BotKarolinska Institutet, Department of Cell and Molecular Biology, Stockholm 171 77, Sweden.
Annika PfeifferKarolinska Institutet, Department of Cell and Molecular Biology, Stockholm 171 77, Sweden.
Fosco GiordanoKarolinska Institutet, Department of Cell and Molecular Biology, Stockholm 171 77, Sweden.
Dharani E ManjeeraKarolinska Institutet, Department of Cell and Molecular Biology, Stockholm 171 77, Sweden.ORCID 0000-0002-1692-0704
Nico P DantumaKarolinska Institutet, Department of Cell and Molecular Biology, Stockholm 171 77, Sweden.
Lena StrömKarolinska Institutet, Department of Cell and Molecular Biology, Stockholm 171 77, Sweden lena.strom@ki.se.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NIPBL is required to load the cohesin complex on to DNA. While the canonical role of cohesin is to couple replicated sister chromatids together until the onset of mitosis, it also promotes tolerance to DNA damage. Here, we show that NIPBL is recruited to DNA damage throughout the cell cycle via independent mechanisms, influenced by type of damage. First, the heterochromatin protein HP1γ (also known as CBX3) recruits NIPBL to DNA double-strand breaks (DSBs) through the corresponding HP1-binding motif within the N-terminus. By contrast, the C-terminal HEAT repeat domain is unable to recruit NIPBL to DSBs but independently targets NIPBL to laser microirradiation-induced DNA damage. Each mechanism is dependent on the RNF8 and RNF168 ubiquitylation pathway, while the recruitment of the HEAT repeat domain requires further ATM or ATR activity. Thus, NIPBL has evolved a sophisticated response to damaged DNA that is influenced by the form of damage, suggesting a highly dynamic role for NIPBL in maintaining genomic stability.

Indexed as

DNA DamageAtaxia Telangiectasia Mutated ProteinsCell CycleCell Cycle ProteinsChromatinChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsDNA Breaks, Double-StrandedGreen Fluorescent ProteinsHEK293 CellsHumansIntercellular Signaling Peptides and ProteinsModels, BiologicalProtein DomainsAtaxia Telangiectasia Mutated ProteinsATR protein, humanCell Cycle ProteinsChromatinChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsGreen Fluorescent ProteinsIntercellular Signaling Peptides and ProteinsMAU2 protein, humanNIPBL protein, humanProteinsUbiquitinUbiquitin-Protein LigasesCohesinDNA damageDNA damage recruitmentGenome stabilityLaser microirradiationNIPBL

Identifiers

PMID28167679
PMCPMC5358341

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.