Evidence map›Paper›PMID 28166781›Full record

ArticleBMC cancer2017

Mechanism of action of trabectedin in desmoplastic small round cell tumor cells.

S Uboldi, I Craparotta, G Colella, E Ronchetti, L Beltrame, S Vicario, S Marchini, N Panini, G Dagrada, F Bozzi and 4 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in BMC cancer, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT07328425 (Phase II Study of Lurbinectedin and Irinotecan in Adult and Young Adult Patients With Advanced Desmoplastic Small Round Cell Tumor), which is not on this map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT07328425 phase2recruitingnot on this mapstarted 2025, after this paper: background citation

Phase II Study of Lurbinectedin and Irinotecan in Adult and Young Adult Patients With Advanced Desmoplastic Small Round Cell Tumor (DSRCT)

TypeinterventionalSponsorItalian Sarcoma GroupRan2025 to 2030Enrolled20ConditionsDesmoplastic Small Round Cell TumorArmsLurbinectedin, Irinotecan
3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Small round cell sarcomas.Nature reviews. Disease primers · 2022
    Review
  6. Review
  7. Review
  8. The FUS-DDIT3 Interactome in Myxoid Liposarcoma.Neoplasia (New York, N.Y.) · 2019
    Article
  9. Article
  10. Targeting Transcription Factors for Cancer Treatment.Molecules (Basel, Switzerland) · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

S UboldiDepartment of Oncology, IRCCS-Istituto di Ricerche Farmacologiche 'Mario Negri', Milan, Italy.
I CraparottaDepartment of Oncology, IRCCS-Istituto di Ricerche Farmacologiche 'Mario Negri', Milan, Italy.
G ColellaExperimental Oncology and Pharmacogenomics, IRCCS Fondazione "Salvatore Maugeri"-Istituto di Pavia, Pavia, Italy.
E RonchettiExperimental Oncology and Pharmacogenomics, IRCCS Fondazione "Salvatore Maugeri"-Istituto di Pavia, Pavia, Italy.
L BeltrameDepartment of Oncology, IRCCS-Istituto di Ricerche Farmacologiche 'Mario Negri', Milan, Italy.
S VicarioDepartment of Oncology, IRCCS-Istituto di Ricerche Farmacologiche 'Mario Negri', Milan, Italy.
S MarchiniDepartment of Oncology, IRCCS-Istituto di Ricerche Farmacologiche 'Mario Negri', Milan, Italy.
N PaniniDepartment of Oncology, IRCCS-Istituto di Ricerche Farmacologiche 'Mario Negri', Milan, Italy.
G DagradaDepartment of Pathology, Fondazione IRCCS Istituto Nazionale Tumori, Milan, Italy.
F BozziDepartment of Pathology, Fondazione IRCCS Istituto Nazionale Tumori, Milan, Italy.
S PilottiDepartment of Pathology, Fondazione IRCCS Istituto Nazionale Tumori, Milan, Italy.
C M GalmariniCell Biology and Pharmacogenomics Department, PharmaMar, Madrid, 28770, Spain.
M D'IncalciDepartment of Oncology, IRCCS-Istituto di Ricerche Farmacologiche 'Mario Negri', Milan, Italy.
R GattaDepartment of Oncology, IRCCS-Istituto di Ricerche Farmacologiche 'Mario Negri', Milan, Italy. raffaella.gatta@guest.marionegri.it.
Mario Negri Institute for Pharmacological Research · ITFondazione IRCCS Istituto Nazionale dei Tumori · ITFondazione Salvatore Maugeri · ITPharmaMar (Spain) · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDesmoplastic small round cell tumor (DSRCT) is a rare and highly aggressive disease, that can be described as a member of the family of small round blue cell tumors. The molecular diagnostic marker is the t(11;22)(p13;q12) translocation, which creates an aberrant transcription factor, EWS-WT1, that underlies the oncogenesis of DSRCT. Current treatments are not very effective so new active drugs are needed. Trabectedin, now used as a single agent for the treatment of soft tissue sarcoma, was reported to be active in some pre-treated DSRCT patients. Using JN-DSRCT-1, a cell line derived from DSRCT expressing the EWS-WT1 fusion protein, we investigated the ability of trabectedin to modify the function of the chimeric protein, as in other sarcomas expressing fusion proteins. After detailed characterization of the EWS-WT1 transcripts structure, we investigated the mode of action of trabectedin, looking at the expression and function of the oncogenic chimera.

methodsWe characterized JN-DSRCT-1 cells using cellular approaches (FISH, Clonogenicity assay) and molecular approaches (Sanger sequencing, ChIP, GEP).

resultsJN-DSRCT-1 cells were sensitive to trabectedin at nanomolar concentrations. The cell line expresses different variants of EWS-WT1, some already identified in patients. EWS-WT1 mRNA expression was affected by trabectedin and chimeric protein binding on its target gene promoters was reduced. Expression profiling indicated that trabectedin affects the expression of genes involved in cell proliferation and apoptosis.

conclusionsThe JN-DSRCT-1 cell line, in vitro, is sensitive to trabectedin: after drug exposure, EWS-WT1 chimera expression decreases as well as binding on its target promoters. Probably the heterogeneity of chimera transcripts is an obstacle to precisely defining the molecular mode of action of drugs, calling for further cellular models of DSRCT, possibly growing in vivo too, to mimic the biological complexity of this disease.

Indexed as

Gene Expression Regulation, NeoplasticAntineoplastic Agents, AlkylatingApoptosisCell Line, TumorCell ProliferationDesmoplastic Small Round Cell TumorDioxolesHumansOncogene Proteins, FusionRNA-Binding Protein EWSTetrahydroisoquinolinesTrabectedinWT1 ProteinsAntineoplastic Agents, AlkylatingDioxolesEWSR1 protein, humanOncogene Proteins, FusionRNA-Binding Protein EWSTetrahydroisoquinolinesTrabectedinWT1 protein, humanWT1 ProteinsDSRCTJN-DSRCT-1Trabectedin

Identifiers

PMID28166781
PMCPMC5294815
OpenAlexW2587218765

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.