Evidence map›Paper›PMID 28166267›Full record

ArticlePloS one2017

Bacterial internalization is required to trigger NIK-dependent NF-κB activation in response to the bacterial type three secretion system.

Miles C Duncan, Natalia G Herrera, Kevin S Johnson, Joanne N Engel, Victoria Auerbuch

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Miles C DuncanDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, California, United States of America.
Natalia G HerreraDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, California, United States of America.
Kevin S JohnsonDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, California, United States of America.
Joanne N EngelDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, California, United States of America.
Victoria AuerbuchDepartment of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, California, United States of America.
University of California, Santa Cruz · USUniversity of California, San Francisco · US

Funding

UNIVERSITY OF CALIFORNIA, SANTA CRUZ IMSD PROGRAMR25GM058903 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI JURICA, MELISSA S · 1999 to 2019
$12.2M
UNIV OF CAL, SANTA CRUZ, MARC HONORS UNDERGRADUATE PROT34GM007910 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI ZAHLER, ALAN M · 1985 to 2020
$7.6M
Innate immunity-based screen for bacterial type III secretion system inhibitorsR01AI106930 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI STONE, VICTORIA AUERBUCH · 2014 to 2016
$1.2M
NIAID NIH HHS R01 AI106930NIGMS NIH HHS R25 GM058903NIGMS NIH HHS T34 GM007910
6 · The paper itself

Abstract

Infection of human cells with Yersinia pseudotuberculosis expressing a functional type III secretion system (T3SS) leads to activation of host NF-κB. We show that the Yersinia T3SS activates distinct NF-κB pathways dependent upon bacterial subcellular localization. We found that wildtype Yersinia able to remain extracellular triggered NF-κB activation independently of the non-canonical NF-κB kinase NIK in HEK293T cells. In contrast, Yersinia lacking the actin-targeting effectors YopEHO, which become internalized into host cells, induce a NIK-dependent response and nuclear entry of the non-canonical NF-κB subunit p52. Blocking actin polymerization and uptake of effector mutant bacteria using cytochalasin D shifted the host NF-κB response from NIK-independent to primarily NIK-dependent. We observed similar results using Pseudomonas aeruginosa, which expresses a related T3SS and the actin-targeting effector ExoT. As the NF-κB response of HEK293T cells to effectorless Yersinia has been used both as a screening tool for chemical inhibitors of the T3SS and for bacterial forward genetic screens, a better understanding of this response is important for tool optimization and interpretation.

Indexed as

Bacterial Physiological PhenomenaType III Secretion SystemsActinsCells, CulturedCytoskeletonEnzyme ActivationHEK293 CellsHumansNF-kappa BNF-kappaB-Inducing KinaseProtein Serine-Threonine KinasesActinsNF-kappa BNF-kappaB-Inducing KinaseProtein Serine-Threonine KinasesType III Secretion Systems

Identifiers

PMID28166267
PMCPMC5293232
OpenAlexW2587546088

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.