Evidence map›Paper›PMID 28166054›Full record

ArticleeLife2017

Elucidation of a four-site allosteric network in fibroblast growth factor receptor tyrosine kinases.

Huaibin Chen, William M Marsiglia, Min-Kyu Cho, Zhifeng Huang, Jingjing Deng, Steven P Blais, Weiming Gai, Shibani Bhattacharya, Thomas A Neubert, Nathaniel J Traaseth and 1 more

Abstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Recurrent Resistance Mutations to Lirafugratinib Inform Treatment Sequencing in FGFR2-Driven Tumors.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Trial
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Gatekeeper mutations activate FGF receptor tyrosine kinases by destabilizing the autoinhibited state.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Fibroblast growth factor receptor fusions in cancer: opportunities and challenges.Journal of experimental & clinical cancer research : CR · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Huaibin ChenDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, United States.
William M MarsigliaDepartment of Chemistry, New York University, New York, United States.
Min-Kyu ChoDepartment of Chemistry, New York University, New York, United States.
Zhifeng HuangWenzhou Medical University, Wenzhou, China.
Jingjing DengSkirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, United States.
Steven P BlaisSkirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, United States.
Weiming GaiDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, United States.
Shibani BhattacharyaNew York Structural Biology Center, New York, United States.
Thomas A NeubertSkirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, United States.
Nathaniel J TraasethDepartment of Chemistry, New York University, New York, United States.
Moosa MohammadiDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, United States.ORCID 0000-0003-2434-9437

Funding

MECHANISMS OF FGF RECEPTOR REGULATION AND SIGNALINGR01DE013686 · NIDCR · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MOHAMMADI, MOOSA · 2000 to 2020
$12.3M
Protein Mass Spectrometry Core Facility for NeuroscienceP30NS050276 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NEUBERT, THOMAS A · 2005 to 2015
$7.9M
Mechanisms of Allostery and Molecular Recognition in the Small Multidrug Resistance FamilyR01AI108889 · NIAID · NEW YORK UNIVERSITY · PI Nathaniel J. Traaseth · 2014 to 2026
$5.4M
FGF Receptor Structure, Dynamics and FunctionR01GM117118 · NIGMS · NEW YORK UNIVERSITY · PI TRAASETH, NATHANIEL J. · 2017 to 2020
$1.3M
Upgrade of 800 MHz SpectrometerS10OD016432 · OD · NEW YORK STRUCTURAL BIOLOGY CENTER · PI PALMER, ARTHUR G · 2014 to 2014
$600k
Acquisition of a Cryoprobe for a 600 MHz NMR SpectrometerS10OD016343 · OD · NEW YORK UNIVERSITY · PI KROGSGAARD, MICHELLE, TRAASETH, NATHANIEL J. · 2014 to 2014
$360k
Mechanisms of resistance and activation conferred by kinases displaying hinge and gate-keeper mutationsF99CA212474 · NCI · NEW YORK UNIVERSITY · PI MARSIGLIA, WILLIAM M · 2016 to 2017
$89k
NCI NIH HHS F99 CA212474NIAID NIH HHS R01 AI108889NIDCR NIH HHS R01 DE013686NIGMS NIH HHS R01 GM117118NIH HHS S10 OD016343NIH HHS S10 OD016432NINDS NIH HHS P30 NS050276
6 · The paper itself

Abstract

Receptor tyrosine kinase (RTK) signaling is tightly regulated by protein allostery within the intracellular tyrosine kinase domains. Yet the molecular determinants of allosteric connectivity in tyrosine kinase domain are incompletely understood. By means of structural (X-ray and NMR) and functional characterization of pathogenic gain-of-function mutations affecting the FGF receptor (FGFR) tyrosine kinase domain, we elucidated a long-distance allosteric network composed of four interconnected sites termed the 'molecular brake', 'DFG latch', 'A-loop plug', and 'αC tether'. The first three sites repress the kinase from adopting an active conformation, whereas the αC tether promotes the active conformation. The skewed design of this four-site allosteric network imposes tight autoinhibition and accounts for the incomplete mimicry of the activated conformation by pathogenic mutations targeting a single site. Based on the structural similarity shared among RTKs, we propose that this allosteric model for FGFR kinases is applicable to other RTKs.

Indexed as

Allosteric RegulationCrystallography, X-RayHumansMagnetic Resonance SpectroscopyMutant ProteinsProtein ConformationReceptor, Fibroblast Growth Factor, Type 2Mutant ProteinsReceptor, Fibroblast Growth Factor, Type 2biochemistrybiophysicscrystal structureE. coliFGF receptorNMRprotein kinasereceptor tyrosine kinasestructural biology

Identifiers

PMID28166054
PMCPMC5293489

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.