Evidence map›Paper›PMID 28165886›Full record

ArticleFly2017

Parsimony and complexity: Cell fate assignment in the developing Drosophila eye.

Yannis Emmanuel Mavromatakis, Andrew Tomlinson

Abstract read
In one paragraph

Article in Fly, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yannis Emmanuel Mavromatakisa Department of Genetics and Development, College of Physicians and Surgeons , Columbia University , New York , NY , USA.
Andrew Tomlinsona Department of Genetics and Development, College of Physicians and Surgeons , Columbia University , New York , NY , USA.

Funding

Photoreceptor specification in the Drosophila eyeR01EY023635 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI TOMLINSON, ANDREW · 2013 to 2016
$1.6M
NEI NIH HHS R01 EY023635
6 · The paper itself

Abstract

The specification of the R7 photoreceptor in the Drosophila eye has become a classic model for understanding how cell fates are assigned in developing systems. R7 is derived from a group of cells that also gives rise to the R1/6 photoreceptor class and the non-photoreceptor cone cells. Our studies examine the signals and cellular information that direct each of these cell types. The cell fates are directed by the combined actions of the Receptor Tyrosine Kinase (RTK) and Notch (N) signaling pathways. The RTK pathway acts to remove the transcription factor Tramtrack (Ttk) which represses the photoreceptor fate. If a cell receives an RTK signal sufficient to remove Ttk then the photoreceptor fate is specified; if not, the cone cell fate results. If Ttk is removed from a cell and its N activity is high then it is specified as an R7, but if its N activity is low then it becomes an R1/6 class photoreceptor. Thus, a remarkably simple molecular code underlies the specification of the fates: 1. Ttk degraded or not: 2. N activity high or low. In the R1/6 and cone cell precursors the molecular codes are achieved with relative simplicity but in the R7 precursor, manifold interactions occur between the RTK and N pathways, and to-date we have identified 4 distinct roles played by N in R7 fate specification. In this review we detail this molecular complexity, and describe how the RTK/N pathway crosstalk eventually leads to the simple molecular code of Tramtrack removed and N activity high. Furthermore, we describe the role played by the transcription factor Lozenge (Lz) in directing retinal precursor fates, and how the RTK/N signals specify different retinal cell types depending on the presence or absence of Lz.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsCell DifferentiationCell LineageDrosophila melanogasterDrosophila ProteinsEyePhotoreceptor Cells, InvertebrateReceptor Protein-Tyrosine KinasesReceptors, NotchSignal TransductionTranscription FactorsDrosophila ProteinsReceptor Protein-Tyrosine KinasesReceptors, NotchTranscription FactorsdeadpanDrosophila, eye, developmentlozengenotchRTKspecification, signalling

Identifiers

PMID28165886
PMCPMC5552274

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.