Evidence map›Paper›PMID 28165023›Full record

ArticleScientific reports2017

Proteome and Acetylome Analysis Identifies Novel Pathways and Targets Regulated by Perifosine in Neuroblastoma.

Xiao Gu, Zhongyan Hua, Yudi Dong, Yue Zhan, Xiaowen Zhang, Wei Tian, Zhihui Liu, Carol J Thiele, Zhijie Li

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Xiao GuMedical Research Center, Shengjing Hospital of China Medical University, Shenyang, 110004, China.
Zhongyan HuaMedical Research Center, Shengjing Hospital of China Medical University, Shenyang, 110004, China.
Yudi DongMedical Research Center, Shengjing Hospital of China Medical University, Shenyang, 110004, China.
Yue ZhanMedical Research Center, Shengjing Hospital of China Medical University, Shenyang, 110004, China.
Xiaowen ZhangMedical Research Center, Shengjing Hospital of China Medical University, Shenyang, 110004, China.
Wei TianMedical Research Center, Shengjing Hospital of China Medical University, Shenyang, 110004, China.
Zhihui LiuCellular &Molecular Biology Section, Pediatric Oncology Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, 20892, USA.
Carol J ThieleCellular &Molecular Biology Section, Pediatric Oncology Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, 20892, USA.
Zhijie LiMedical Research Center, Shengjing Hospital of China Medical University, Shenyang, 110004, China.
China Medical University · CNNational Cancer Institute · USNational Institutes of Health · US

Funding

Pathophysiologic Consequences of Survival Signaling in NeuroblastomaZIABC010789 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI THIELE, CAROL J · 2009 to 2023
$12.0M
6 · The paper itself

Abstract

Perifosine, an Akt inhibitor, has been shown to be effective in controlling neuroblastoma tumor growth. However, studies indicate that in addition to the ability to inhibit Akt, other mechanisms contribute to perifosine's anti-tumor activity. To gain insight into perifosine anti-tumor activity in neuroblastoma we have studied changes in the proteome and acetylome after perifosine treatment in SK-N-AS neuroblastoma cells using SILAC labeling, affinity enrichment, high-resolution and LC-MS/MS analysis. Bioinformatic analysis indicates that, a total of 5,880 proteins and 3,415 lysine acetylation sites were quantified in SK-N-AS cells and 216 differentially expressed proteins and 115 differentially expressed lysine acetylation sites were obtained. These differentially expressed proteins and lysine acetylated proteins were involved in a number of different biological functions, metabolic pathways and pathophysiological processes. This study details the impact of perifosine on proteome and lysine acetylome in SK-N-AS cells and expands our understanding of the mechanisms of perifosine action in neuroblastoma.

Indexed as

AcetylationAmino AcidsAntineoplastic AgentsCell Line, TumorChromatography, LiquidHumansLysineMetabolic Networks and PathwaysNeuroblastomaPhosphorylcholineProteomeTandem Mass SpectrometryAmino AcidsAntineoplastic AgentsLysineperifosinePhosphorylcholineProteome

Identifiers

PMID28165023
PMCPMC5292702
OpenAlexW2587039578

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.