Evidence map›Paper›PMID 28164152›Full record

ArticleNPJ breast cancer2016

"Big Data" for Breast Cancer: Where to look and what you will find.

Susan E Clare, Pamela L Shaw

Abstract read
In one paragraph

Article in NPJ breast cancer, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Supporting data sharing.NPJ breast cancer · 2019
    Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Susan E ClareDepartment of Surgery, Feinberg School of Medicine, Northwestern University, 303 E. Superior Street, Lurie 4-113, Chicago, IL 60611.
Pamela L ShawBiosciences & Bioinformatics Librarian, NIH Public Access Compliance Reporter (PACR), Galter Health Sciences Library, Feinberg School of Medicine, Northwestern University, 303 E. Chicago Ave., Room 1-285, Chicago, IL 60611.

Funding

Developing Skills in Research BioinformaticsF37LM009568 · NLM · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SHAW, PAMELA L · 2007 to 2008
$43k
NLM NIH HHS F37 LM009568
6 · The paper itself

Abstract

Accessing the massive amount of breast cancer data that is currently publically available may seem daunting to the brand new graduate student embarking on his/her first project or even to the seasoned lab leader, who may wish to explore a new avenue of investigation. In this review, we provide an overview of data resources focusing on high-throughput data and on cancer-related data resources. While not intended as an exhaustive list, the information included in this review will provide a jumping off point with descriptions of and links to the various data resources of interest. The review is divided into six sections: (1) Compendia of data resources; (2) Biomolecular Repository "Hubs"' (3) A list of cancer-related data resources, which provides information on contents of the resource and whether the resource enables upload and analysis of investigator provided data; (4) A list of seminal publications containing specific breast cancer data, e.g., publications from METBRIC, Sanger, TCGA; (5) A list of journals focused on data science that include cancer-related "Big Data"; and (6) Miscellaneous resources.

Identifiers

PMID28164152
PMCPMC5289822

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.