Evidence map›Paper›PMID 28163789›Full record

ArticleGenes & nutrition2017

A porcine gluteus medius muscle genome-wide transcriptome analysis: dietary effects of omega-6 and omega-3 fatty acids on biological mechanisms.

Magdalena Ogłuszka, Agnieszka Szostak, Marinus F W Te Pas, Ewa Poławska, Paweł Urbański, Tadeusz Blicharski, Chandra S Pareek, Edyta Juszczuk-Kubiak, Jenelle R Dunkelberger, Jarosław O Horbańczuk and 1 more

Open access · goldAbstract read
In one paragraph

Article in Genes & nutrition, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Magdalena OgłuszkaInstitute of Genetics and Animal Breeding of the Polish Academy of Sciences, Postępu 36A, 05-552 Jastrzębiec, Poland.
Agnieszka SzostakInstitute of Genetics and Animal Breeding of the Polish Academy of Sciences, Postępu 36A, 05-552 Jastrzębiec, Poland.
Marinus F W Te PasBreeding and Genomic Centre, Wageningen UR Livestock Research, 6700 AH Wageningen, The Netherlands.
Ewa PoławskaInstitute of Genetics and Animal Breeding of the Polish Academy of Sciences, Postępu 36A, 05-552 Jastrzębiec, Poland.
Paweł UrbańskiInstitute of Genetics and Animal Breeding of the Polish Academy of Sciences, Postępu 36A, 05-552 Jastrzębiec, Poland.
Tadeusz BlicharskiInstitute of Genetics and Animal Breeding of the Polish Academy of Sciences, Postępu 36A, 05-552 Jastrzębiec, Poland.
Chandra S PareekDivision of Functional Genomics in Biological and Biomedical Research, Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, 87-100 Torun, Poland.
Edyta Juszczuk-KubiakInstitute of Genetics and Animal Breeding of the Polish Academy of Sciences, Postępu 36A, 05-552 Jastrzębiec, Poland.
Jenelle R DunkelbergerDepartment of Animal Science, Iowa State University, 2255 Kildee Hall, Ames, IA 50011 USA.
Jarosław O HorbańczukInstitute of Genetics and Animal Breeding of the Polish Academy of Sciences, Postępu 36A, 05-552 Jastrzębiec, Poland.
Mariusz PierzchałaInstitute of Genetics and Animal Breeding of the Polish Academy of Sciences, Postępu 36A, 05-552 Jastrzębiec, Poland.
Polish Academy of Sciences · PLIowa State University · USNicolaus Copernicus University · PLWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe level of omega-6 and omega-3 polyunsaturated fatty acids can affect many cellular systems and function via nuclear receptors or the bioactive lipid regulation of gene expression. The objective of this study was to investigate changes in the muscle transcriptome and the biological functions regulated by increased consumption of omega-3 and omega-6 fatty acids in the pig gluteus medius muscle.

resultsThe transcriptome of the gluteus medius muscle was studied for pigs subjected to either a control diet or a diet supplemented with linseed and rapeseed oil to increase polyunsaturated fatty acid content. Next-generation sequencing (NGS) was used to generate the muscle tissue transcriptome database pointing differentially expressed genes (DEG). Comparative expression analyses identified 749 genes significantly differing at least in the twofold of change between two groups of animals fed with divergent level of omega-3 and omega-6 fatty acids. The expression of 219 genes was upregulated, and the expression of 530 genes was downregulated in the group of pigs supplemented with omega-3 and omega-6 fatty acids in relation to control group pigs. Results of RNA-seq indicated a role of fatty acid in the regulation of the expression of genes which are essential for muscle tissue development and functioning. Functional analysis revealed that the identified genes were important for a number of biological processes including inflammatory response, signaling, lipid metabolism, and homeostasis.

conclusionsSummarizing, obtained results provide strong evidence that omega-6 and omega-3 fatty acids regulate fundamental metabolic processes in muscle tissue development and functioning.

Indexed as

Gluteus medius muscleOmega-3 fatty acidOmega-6 fatty acidPigTranscriptome

Identifiers

PMID28163789
PMCPMC5282897
OpenAlexW2583831059

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.